Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d19
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.53 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.53 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   5.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 494 VFSNLQSLRNYLIKPKE 444
           + SNL+S++ Y IKPKE
Sbjct: 138 LLSNLESIQIYSIKPKE 154


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 494 VFSNLQSLRNYLIKPKE 444
           + SNL+S++ Y IKPKE
Sbjct: 94  LLSNLESIQIYSIKPKE 110


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 479 GDLKRHKSDTIVLDKHIVDVFYKKMGSEFTIKDYRDDS 592
           G+LK+HKSD      +I       + S F I    ++S
Sbjct: 46  GELKQHKSDYFYFSFYITSYTLLSVYSLFRIATNENNS 83


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 479 GDLKRHKSDTIVLDKHIVDVFYKKMGSEFTIKDYRDDS 592
           G+LK+HKSD      +I       + S F I    ++S
Sbjct: 46  GELKQHKSDYFYFSFYITSYTLLSVYSLFRIATNENNS 83


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 287 QYSLFAVLFLCNILYCFS 234
           +YS F ++F+  + +CFS
Sbjct: 145 RYSAFGMIFVALLEHCFS 162


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 407 SNKFYYSCVDLLIPSALSNNYEGSG 481
           +N  YYS +D L  S +S++  G+G
Sbjct: 254 NNYPYYSNMDYLSSSTMSHSQFGNG 278


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 482 DLKRHKSDTIVLDKHIVD 535
           DLK+H+SD  VL + I +
Sbjct: 67  DLKQHQSDDPVLSQIIAN 84


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 260 EIIPQIKSIENFNNLKWDEDPLIEY 334
           EI P+I + ++    KWDE   + Y
Sbjct: 311 EICPEILNKDSGWTKKWDEHGKVPY 335


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = -1

Query: 355 FVRDRYCIFD*RIFIPFQIIKIFNTLYLRYYFYAT 251
           F  D   I D  +FI    + +   LY+  Y   T
Sbjct: 207 FKIDNSLILDLLVFITINFVVLLGDLYVTLYIILT 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,236
Number of Sequences: 336
Number of extensions: 2944
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)