Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d19
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4036|AAF56646.2|  485|Drosophila melanogaster CG31075-P...    31   1.00 
BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p pro...    31   1.3  
BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p pro...    31   1.3  
AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-P...    31   1.3  
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ...    29   5.3  

>AE014297-4036|AAF56646.2|  485|Drosophila melanogaster CG31075-PA
           protein.
          Length = 485

 Score = 31.5 bits (68), Expect = 1.00
 Identities = 17/74 (22%), Positives = 33/74 (44%)
 Frame = +2

Query: 260 EIIPQIKSIENFNNLKWDEDPLIEYTIPITYKIVFKKANEQTKYTYKDDSNKFYYSCVDL 439
           EI   ++SI  F++L+   D        +   ++    N+  K+    D+   + +C D 
Sbjct: 388 EIFGPVQSIFKFSSLEEMIDRANNVQYGLAAGVITNDINKALKFANNVDAGSVWINCYDA 447

Query: 440 LIPSALSNNYEGSG 481
           ++PS     Y+ SG
Sbjct: 448 VLPSTPFGGYKHSG 461


>BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p
           protein.
          Length = 464

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +3

Query: 333 IQYRSRTKLYSRKQTNKQNIHIRMILTNFITHASIYSF 446
           ++Y     LYS+ +TN Q  ++++  +N ++H  +  F
Sbjct: 148 VKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPF 185


>BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p
           protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +3

Query: 333 IQYRSRTKLYSRKQTNKQNIHIRMILTNFITHASIYSF 446
           ++Y     LYS+ +TN Q  ++++  +N ++H  +  F
Sbjct: 55  VKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPF 92


>AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-PA
           protein.
          Length = 458

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +3

Query: 333 IQYRSRTKLYSRKQTNKQNIHIRMILTNFITHASIYSF 446
           ++Y     LYS+ +TN Q  ++++  +N ++H  +  F
Sbjct: 142 VKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPF 179


>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
           protein.
          Length = 1150

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 215 PIMKSIQRS-NTKCCIEIIPQIKSI-ENFNNLKWDEDPLIEYTI--PITYK 355
           P +K I  + N K  I+    I  I ENF NL+  E+ LI YTI  PIT K
Sbjct: 25  PYVKIIHHNKNYKGMIDTGSSINIIRENFENLEEKEENLIVYTIKGPITLK 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,642,208
Number of Sequences: 53049
Number of extensions: 439183
Number of successful extensions: 1196
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)