Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d19
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr...    32   0.30 
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p...    32   0.30 
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical...    29   2.1  
Z69302-3|CAA93266.1|  442|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U41996-8|AAA83477.1|  310|Caenorhabditis elegans Hypothetical pr...    28   4.9  

>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
           protein C47E8.8 protein.
          Length = 1675

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 521 KHIVDVFYKKMGSEFTIKDYRDDSTKEISDY 613
           KH+  VF ++ GSE T+++  DD  K ISD+
Sbjct: 347 KHLCHVFKQEFGSEKTVEEIDDDLGKLISDF 377


>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
           protein C47E8.8 protein.
          Length = 1675

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 521 KHIVDVFYKKMGSEFTIKDYRDDSTKEISDY 613
           KH+  VF ++ GSE T+++  DD  K ISD+
Sbjct: 347 KHLCHVFKQEFGSEKTVEEIDDDLGKLISDF 377


>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
            protein Y67A10A.3 protein.
          Length = 1237

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +1

Query: 97   IIHFRL*FRINSSKNHNQIHNNSSDWGINGFYKLKDKI*TNHEIYSEKQYKMLHRNNTAN 276
            +IHF L F INS K    +  N+ +  +NG +K +     +  + SEK+ K   RN   N
Sbjct: 1157 LIHFLLAFEINSEK---VLETNAKNKKLNGLHKAE----ASSVVKSEKEKKKNKRNTADN 1209


>Z69302-3|CAA93266.1|  442|Caenorhabditis elegans Hypothetical
           protein F40F8.8 protein.
          Length = 442

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +2

Query: 455 LSNNYEGSGDLKRHKSDTIVLDKHI-VDVFYKKMGSEFTIKDYRDDSTKEISDYKL 619
           L   Y+G G+ + +K + IVL + + V +  +++GS    KD+R  S   I+D  L
Sbjct: 340 LGQVYDGEGE-EINKEEEIVLYRPVYVKLADRRIGSPHVSKDFRSGSFTRIADSSL 394


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 206 KFKPIMKSIQRSNTKCCIEIIPQIKSIENFNNLKWDEDPLIEYTIPITYK 355
           +FK I   + R N   C + + Q+K +EN   L  + +PL  Y+   TY+
Sbjct: 206 QFKGISSLMIRKNKLNCWQDVRQLKKLENLTVLTMEMNPL--YSSDYTYR 253


>U41996-8|AAA83477.1|  310|Caenorhabditis elegans Hypothetical
           protein F38E1.3 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +2

Query: 284 IENFNNLKWDEDPLIEYTIPITYKIVFKKANEQTKYTYKDDSNKFYYSCVDLLIPSAL 457
           I N N LK    P +      T K      ++  +  +KDD   ++Y  +DL++P  L
Sbjct: 179 INNQNKLK---TPRVTIRFKGTLKFASLSCHKGIEMGWKDDCESWFYMLLDLIVPFGL 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,453,740
Number of Sequences: 27780
Number of extensions: 250471
Number of successful extensions: 808
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)