Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6d09
(505 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 203 2e-51
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 200 1e-50
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 198 4e-50
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 160 1e-38
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 159 2e-38
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 154 9e-37
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 152 5e-36
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 146 2e-34
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 131 1e-29
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 130 2e-29
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 111 9e-24
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 110 2e-23
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 97 2e-19
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 97 3e-19
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 9e-16
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 77 2e-13
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 71 1e-11
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 67 2e-10
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 56 6e-07
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 2e-06
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 52 7e-06
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 51 1e-05
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 43 0.005
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 40 0.024
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 40 0.042
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.91
UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=... 33 2.8
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 33 3.7
UniRef50_Q5CXY0 Cluster: Signal peptide-containing protein with ... 33 4.8
UniRef50_A0FZB1 Cluster: Putative uncharacterized protein; n=2; ... 32 6.4
UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, who... 32 8.5
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 203 bits (495), Expect = 2e-51
Identities = 97/130 (74%), Positives = 110/130 (84%)
Frame = +2
Query: 116 TKCPLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 295
T P E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 141 TAMPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 200
Query: 296 TVQLTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRN 475
TV LT+ N QA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+G I ED++ IA++MR
Sbjct: 201 TVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRP 260
Query: 476 RSMARYLSGS 505
RSMAR L G+
Sbjct: 261 RSMARELKGT 270
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 200 bits (488), Expect = 1e-50
Identities = 94/127 (74%), Positives = 111/127 (87%)
Frame = +2
Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 304
P NEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 305 LTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSM 484
LT+ N QAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+G I+ ++++ IA+ MR+RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 485 ARYLSGS 505
AR LSG+
Sbjct: 122 ARELSGT 128
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 198 bits (484), Expect = 4e-50
Identities = 93/127 (73%), Positives = 110/127 (86%)
Frame = +2
Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 304
P NEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 34 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 93
Query: 305 LTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSM 484
LT+ N QAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+G I+ ++++ I + MR+RS+
Sbjct: 94 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRSL 153
Query: 485 ARYLSGS 505
AR LSG+
Sbjct: 154 ARELSGT 160
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 160 bits (389), Expect = 1e-38
Identities = 82/151 (54%), Positives = 107/151 (70%), Gaps = 24/151 (15%)
Frame = +2
Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW-------- 280
P NE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 2 PPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGCC 61
Query: 281 ----------------KGLKITVQLTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKN 412
KGL++TV+LT+ N QA ++VVPSA++L+I+ALKEPPRDRKK+KN
Sbjct: 62 DARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEKN 121
Query: 413 IKHNGXISLEDVIGIAKIMRNRSMARYLSGS 505
IKHN I L+D+I IA+ MR+RS+A+ L G+
Sbjct: 122 IKHNKSIPLDDIIEIARTMRSRSLAKELKGT 152
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 159 bits (387), Expect = 2e-38
Identities = 77/130 (59%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
Frame = +2
Query: 119 KCPLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 295
K P N + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 296 TVQLTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRN 475
TV+LTV N QA+++VVP+A+AL+I+ALKEP +DRKK K I H G SL+D+I +A++MR
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP 181
Query: 476 RSMARYLSGS 505
+S A+ L+G+
Sbjct: 182 KSCAKNLAGT 191
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 154 bits (374), Expect = 9e-37
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQAQIA 337
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+ N QAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 338 VVPSAAALIIRALKEPPRDRKKQKN 412
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 152 bits (368), Expect = 5e-36
Identities = 69/116 (59%), Positives = 91/116 (78%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQAQIA 337
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+ N QA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 338 VVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSMARYLSGS 505
VVP++A+++++ L E PRDRKK KNIKHNG + +E V IA+ M+ +S A+ G+
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGT 140
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 146 bits (354), Expect = 2e-34
Identities = 71/122 (58%), Positives = 88/122 (72%)
Frame = +2
Query: 119 KCPLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 298
K P N+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 299 VQLTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNR 478
QL V N A + V PS A+ +IRALKEPPRDRKK KNIKH+G I+ +++ IAK
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAPN 174
Query: 479 SM 484
SM
Sbjct: 175 SM 176
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 131 bits (316), Expect = 1e-29
Identities = 55/127 (43%), Positives = 89/127 (70%)
Frame = +2
Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 304
P + NE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 2 PPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMVN 61
Query: 305 LTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSM 484
L N A + V+P+++AL+I+ + RDRKK KN+KHNG ++LE VI +A+ + +S+
Sbjct: 62 LRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKSL 121
Query: 485 ARYLSGS 505
A+ +G+
Sbjct: 122 AKTFTGT 128
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 130 bits (313), Expect = 2e-29
Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
Frame = +2
Query: 146 EIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNX 322
+ K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL + +
Sbjct: 10 DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAIKDR 67
Query: 323 QAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMR-NRSMARYLS 499
+A + V PS A LII++LKEPPRDRKK+KNI HNG + + +V+ IA+I R +RS + LS
Sbjct: 68 KATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSNSLS 127
Query: 500 GS 505
G+
Sbjct: 128 GT 129
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 111 bits (267), Expect = 9e-24
Identities = 65/120 (54%), Positives = 79/120 (65%)
Frame = +2
Query: 146 EIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQ 325
EIK+ LRC G EV A S+LAPKI PLGLSPKK Q
Sbjct: 137 EIKVAYLRCTGDEVSAMSALAPKISPLGLSPKK-------------------------GQ 171
Query: 326 AQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSMARYLSGS 505
AQI VVPSA+ALII+ALKEP RDRKKQKNIKH+G I+ ++++ IA+ MR+RS+ R LSG+
Sbjct: 172 AQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLDRELSGT 231
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 110 bits (264), Expect = 2e-23
Identities = 55/97 (56%), Positives = 63/97 (64%)
Frame = -2
Query: 432 MXPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACXFXTVSCTVILRPFQSLVALAMS 253
M PLCL F F S GGS +A+M + A+GTT AC F + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 252 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISF 142
SPTF GD+P GPI GAK APTSPPT K+ L SF
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSF 97
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 97.5 bits (232), Expect = 2e-19
Identities = 52/120 (43%), Positives = 71/120 (59%)
Frame = -1
Query: 502 ARKVPGH*SVSHDLRNADYIFKGDVAVVFDIFLLFTVTRRLLKGSDDKGCCRGNNSYLGL 323
+R+ G V H N D + KGDV+ V +FLL +V+ L+G DD+G R + L L
Sbjct: 23 SREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSL 82
Query: 322 XVXNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFI 143
V + Q HSD +TLP+T LG+VI HLF RQT+ + GQ GTD P Q+HDF+ +
Sbjct: 83 SVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLV 142
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 96.7 bits (230), Expect = 3e-19
Identities = 46/117 (39%), Positives = 75/117 (64%)
Frame = +2
Query: 155 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQAQI 334
++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V++ N Q +
Sbjct: 12 VLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKVRIVSKNRQPTV 71
Query: 335 AVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSMARYLSGS 505
+VVP+A++L+++AL E PR K + + H G + + V+ IAK +R S A +G+
Sbjct: 72 SVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELRANSFALKYAGT 128
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 9e-16
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +2
Query: 155 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 310
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 77.4 bits (182), Expect = 2e-13
Identities = 34/77 (44%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLTVXNXQA 328
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 329 QIAVVPSAAALIIRALK 379
+ +VPS ++L+ R ++
Sbjct: 67 YLKIVPSVSSLLKREMQ 83
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 71.3 bits (167), Expect = 1e-11
Identities = 40/110 (36%), Positives = 63/110 (57%)
Frame = -1
Query: 472 SHDLRNADYIFKGDVAVVFDIFLLFTVTRRLLKGSDDKGCCRGNNSYLGLXVXNCQLHSD 293
SH L N D +F+ V VFD+ +L +V+ L+ D++ NN L V + QL+S+
Sbjct: 64 SHLLSNFDDVFQLQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSN 123
Query: 292 LETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFI 143
L+TL + GLG++ T+L QT+ T+ Q T+F D+SQ+ +FI
Sbjct: 124 LDTLEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFI 173
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +2
Query: 371 ALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSMARYLSGS 505
A KEPPRDRKKQKNIKH+G I+ ++++ IA+ MR+RS+AR LSG+
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGT 218
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 55.6 bits (128), Expect = 6e-07
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 232
P NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 2 PPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
Score = 48.8 bits (111), Expect = 7e-05
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = +2
Query: 410 NIKHNGXISLEDVIGIAKIMRNRSMARYLSGS 505
++KHNG I+L+DV +AK+MR RSMAR+LSG+
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGT 98
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -3
Query: 284 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 183
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 52.0 bits (119), Expect = 7e-06
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQAQ 331
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V +
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 332 IAV---VPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSMARYLSG 502
V +P A+ALI + + ++ + + G I++E ++ IAK+ ++ +A L
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKMKQDAMLAYNLKN 121
Query: 503 S 505
+
Sbjct: 122 A 122
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 51.2 bits (117), Expect = 1e-05
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQAQ 331
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V +
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 332 IAV---VPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSMARY 493
+ +P ALI + L + + + G ++LE VI IAK M+ +M Y
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAK-MKKDAMLSY 117
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 42.7 bits (96), Expect = 0.005
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Frame = +2
Query: 176 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQA---QIAV-V 343
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + + +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 344 PSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIA 460
P +AL+ + L KK++ + G +LE + +A
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVA 107
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 40.3 bits (90), Expect = 0.024
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 398 KKQKNIKHNGXISLEDVIGIAKIMRNRSMARYLSGS 505
K QK+IKH+G IS ++ + MR+RS+AR LSG+
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGT 105
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 39.5 bits (88), Expect = 0.042
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVXNXQAQ 331
K + + GG L P + LGL+ ++V I T+ +KG+ + V + + + +
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 332 IAV---VPSAAALIIRAL--KEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSMARYL 496
+ VP+ +L+++A+ +EP D +K G + LE + IA + + A+ L
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKK----IGNLDLEQIADIAIKKKPQLSAKTL 119
Query: 497 SGS 505
+ +
Sbjct: 120 TAA 122
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 35.1 bits (77), Expect = 0.91
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = -1
Query: 433 DVAVVFDIFLLFTVTRRLLKGSDDKGCCRGNNSYLGLXVXNCQLHSDLETLPVT 272
++++ + +F LF T + + +D C G S++ L + + +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=1;
Rhodoferax ferrireducens T118|Rep: Major facilitator
superfamily MFS_1 - Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118)
Length = 381
Score = 33.5 bits (73), Expect = 2.8
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = -2
Query: 486 AIDLFLMIFAMPITSSREMXPLCLIFFCFLRSRGGSLRALMIRAAAEGT--TAIWACXFX 313
A LM+ P TS + L +F C G A + R A +GT TA C F
Sbjct: 277 AASSILMVMLQPSTSPALVLTLVCVFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFF 336
Query: 312 TVSCTVILRPFQSLVALAMSS 250
T V+ P +++ A+ +
Sbjct: 337 TYIGVVVSAPLFGVLSTALGN 357
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 33.1 bits (72), Expect = 3.7
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGD-----DIAKATSDWKGLKITVQL 307
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 308 TV-XNXQAQIAVVPSAAALIIRALKEPPRDRK 400
TV +A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q5CXY0 Cluster: Signal peptide-containing protein with
transmembrane domain; n=2; Cryptosporidium|Rep: Signal
peptide-containing protein with transmembrane domain -
Cryptosporidium parvum Iowa II
Length = 1633
Score = 32.7 bits (71), Expect = 4.8
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = -1
Query: 496 KVPGH*SVSHDLRNADYIFKGDVAVVFDIFLLF-TVTRRLLKGSDDKGCCRGNNSYLGLX 320
++PG +S + + + G+ ++ F V GS C+ N +
Sbjct: 781 EIPGEVKISQSIVRPNIFYPGEYRAFGLAYIAFGDVAIATRIGSSAPEECK-NEWVINRK 839
Query: 319 VXNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRG 206
+ D+ T TC G+VITH+ + K+T+ G
Sbjct: 840 NKKLEKPKDVGTFAFTCPKGHVITHIHAKSNKKTELMG 877
>UniRef50_A0FZB1 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia phymatum STM815
Length = 280
Score = 32.3 bits (70), Expect = 6.4
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 132 LRGHFVDYLVQLYX-IITLNPXGWVWIPQGLPPERSETXAAHXKR 1
++GH ++Y Y ++ +NP + W+P+G P S+ + +R
Sbjct: 163 VKGHKLEYAPPRYSDLVLMNPASYAWVPEGTPGVSSKWLGSFTER 207
>UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_4,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 169
Score = 31.9 bits (69), Expect = 8.5
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 284 GLKITVQLTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHN 424
GLK+ ++ Q +V+ + AL+I A + PR+++KQK ++ N
Sbjct: 77 GLKLILENMPKEVQRNQSVIRNFLALLIHARLQQPRNKQKQKKLRLN 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,683,179
Number of Sequences: 1657284
Number of extensions: 9347152
Number of successful extensions: 22487
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 21953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22475
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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