Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d09
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...   203   1e-52
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...   202   3e-52
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...   202   3e-52
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...   202   3e-52
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...   202   3e-52
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    28   6.2  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    28   6.2  
AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,...    28   8.3  

>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score =  203 bits (495), Expect = 1e-52
 Identities = 97/130 (74%), Positives = 110/130 (84%)
 Frame = +2

Query: 116 TKCPLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 295
           T  P      E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 141 TAMPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 200

Query: 296 TVQLTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRN 475
           TV LT+ N QA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+G I  ED++ IA++MR 
Sbjct: 201 TVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRP 260

Query: 476 RSMARYLSGS 505
           RSMAR L G+
Sbjct: 261 RSMARELKGT 270


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score =  202 bits (492), Expect = 3e-52
 Identities = 96/127 (75%), Positives = 109/127 (85%)
 Frame = +2

Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 304
           P      E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV 
Sbjct: 2   PPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITVC 61

Query: 305 LTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSM 484
           LT+ N QA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+G I  ED++ IA++MR RSM
Sbjct: 62  LTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSM 121

Query: 485 ARYLSGS 505
           AR L G+
Sbjct: 122 ARELKGT 128


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score =  202 bits (492), Expect = 3e-52
 Identities = 96/127 (75%), Positives = 109/127 (85%)
 Frame = +2

Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 304
           P      E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV 
Sbjct: 2   PPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITVC 61

Query: 305 LTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSM 484
           LT+ N QA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+G I  ED++ IA++MR RSM
Sbjct: 62  LTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSM 121

Query: 485 ARYLSGS 505
           AR L G+
Sbjct: 122 ARELKGT 128


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score =  202 bits (492), Expect = 3e-52
 Identities = 96/127 (75%), Positives = 109/127 (85%)
 Frame = +2

Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 304
           P      E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV 
Sbjct: 2   PPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITVC 61

Query: 305 LTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSM 484
           LT+ N QA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+G I  ED++ IA++MR RSM
Sbjct: 62  LTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSM 121

Query: 485 ARYLSGS 505
           AR L G+
Sbjct: 122 ARELKGT 128


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score =  202 bits (492), Expect = 3e-52
 Identities = 96/127 (75%), Positives = 109/127 (85%)
 Frame = +2

Query: 125 PLSLTQNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 304
           P      E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV 
Sbjct: 2   PPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITVC 61

Query: 305 LTVXNXQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGXISLEDVIGIAKIMRNRSM 484
           LT+ N QA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+G I  ED++ IA++MR RSM
Sbjct: 62  LTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSM 121

Query: 485 ARYLSGS 505
           AR L G+
Sbjct: 122 ARELKGT 128


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 183  KSVPH-HLWPLKSVLLVCLLKRWVMTLPRPQVTGRVSRSL 299
            K V H H W LK   +   ++ W+  L +PQ T R SR++
Sbjct: 4711 KDVIHKHFW-LKREEICAQIEGWIEELGKPQYTERASRTI 4749


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 183  KSVPH-HLWPLKSVLLVCLLKRWVMTLPRPQVTGRVSRSL 299
            K V H H W LK   +   ++ W+  L +PQ T R SR++
Sbjct: 4711 KDVIHKHFW-LKREEICAQIEGWIEELGKPQYTERASRTI 4749


>AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,
           isoform B protein.
          Length = 778

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +2

Query: 113 STKCPLSLTQNEIKIVNLRCVGGEVGATSSLAPKI--GPLGLSPKKVGDDIAKATSDWKG 286
           +T   +S + +E++++ +   G +   TSS++  I  GP G +P  VG  ++  ++  +G
Sbjct: 492 TTTTAVSSSPSEMELL-MCSSGNKKSLTSSVSAGITGGPAGAAPATVGSTLSPHSAHNQG 550

Query: 287 LKITVQ 304
             +TVQ
Sbjct: 551 SSLTVQ 556


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,487,599
Number of Sequences: 53049
Number of extensions: 450578
Number of successful extensions: 1090
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)