Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6d08
(584 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein. 30 6.9
BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation ... 30 6.9
BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation ... 30 6.9
BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation ... 30 6.9
BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein. 30 6.9
AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation ... 30 6.9
AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation f... 30 6.9
BC006512-1|AAH06512.1| 279|Homo sapiens chromosome 3 open readi... 29 9.1
BC006475-1|AAH06475.1| 279|Homo sapiens chromosome 3 open readi... 29 9.1
>CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein.
Length = 611
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 269 QMTKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSL 448
Q+ +P L+ +P P + E+T + + R +S+ + T +N +R +SL
Sbjct: 390 QLDEPKLERRPR---ERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSL 446
Query: 449 ESDNL 463
E++ L
Sbjct: 447 ENETL 451
>BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 269 QMTKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSL 448
Q+ +P L+ +P P + E+T + + R +S+ + T +N +R +SL
Sbjct: 390 QLDEPKLERRPR---ERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSL 446
Query: 449 ESDNL 463
E++ L
Sbjct: 447 ENETL 451
>BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 269 QMTKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSL 448
Q+ +P L+ +P P + E+T + + R +S+ + T +N +R +SL
Sbjct: 390 QLDEPKLERRPR---ERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSL 446
Query: 449 ESDNL 463
E++ L
Sbjct: 447 ENETL 451
>BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 269 QMTKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSL 448
Q+ +P L+ +P P + E+T + + R +S+ + T +N +R +SL
Sbjct: 390 QLDEPKLERRPR---ERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSL 446
Query: 449 ESDNL 463
E++ L
Sbjct: 447 ENETL 451
>BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein.
Length = 349
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 269 QMTKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSL 448
Q+ +P L+ +P P + E+T + + R +S+ + T +N +R +SL
Sbjct: 128 QLDEPKLERRPR---ERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSL 184
Query: 449 ESDNL 463
E++ L
Sbjct: 185 ENETL 189
>AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B variant protein.
Length = 611
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 269 QMTKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSL 448
Q+ +P L+ +P P + E+T + + R +S+ + T +N +R +SL
Sbjct: 390 QLDEPKLERRPR---ERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSL 446
Query: 449 ESDNL 463
E++ L
Sbjct: 447 ENETL 451
>AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation
factor 4B protein.
Length = 611
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 269 QMTKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSL 448
Q+ +P L+ +P P + E+T + + R +S+ + T +N +R +SL
Sbjct: 390 QLDEPKLERRPR---ERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSL 446
Query: 449 ESDNL 463
E++ L
Sbjct: 447 ENETL 451
>BC006512-1|AAH06512.1| 279|Homo sapiens chromosome 3 open reading
frame 26 protein.
Length = 279
Score = 29.5 bits (63), Expect = 9.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 275 TKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKK 376
++ T QPK F +PK + E TT+ KRR+KK
Sbjct: 46 SEKTKQPKEC--FLIQPKERKENTTKTRKRRKKK 77
>BC006475-1|AAH06475.1| 279|Homo sapiens chromosome 3 open reading
frame 26 protein.
Length = 279
Score = 29.5 bits (63), Expect = 9.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 275 TKPTLQPKPMGTFRTEPKLKDEQTTQANKRRQKK 376
++ T QPK F +PK + E TT+ KRR+KK
Sbjct: 46 SEKTKQPKEC--FLIQPKERKENTTKTRKRRKKK 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,277,953
Number of Sequences: 237096
Number of extensions: 1132478
Number of successful extensions: 2619
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2619
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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