Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d08
         (584 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021465-1|AAX33613.1|  239|Drosophila melanogaster AT13050p pro...    31   0.87 
AY118901-1|AAM50761.1|  509|Drosophila melanogaster LD10524p pro...    29   6.1  
AE013599-3044|AAF57445.1|  726|Drosophila melanogaster CG11180-P...    29   6.1  
AE014134-3066|AAF53780.1|  335|Drosophila melanogaster CG17564-P...    28   8.1  

>BT021465-1|AAX33613.1|  239|Drosophila melanogaster AT13050p
           protein.
          Length = 239

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = +2

Query: 326 KLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRFRRSLESDNLFVIRDLDEIEFLGK 505
           KL++E  T A  +RQ K NS  VRN    Q   R RF  ++    + +  D   +  LG 
Sbjct: 76  KLQEEMLTSA--KRQTKLNSARVRNMYKIQERLRRRFIENMRQRMVQITNDA-ALTVLGL 132

Query: 506 DND 514
            ND
Sbjct: 133 KND 135


>AY118901-1|AAM50761.1|  509|Drosophila melanogaster LD10524p
           protein.
          Length = 509

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 256 VICPSDDKAHTSAEANGHVQNRTKVKRRTNDTSE*KKTKE 375
           VI   DD  H + E++   +NRTK K ++ D+ E  + +E
Sbjct: 253 VIVIDDDDLHRNNESHTSNENRTKNKSKSKDSQETTQIQE 292


>AE013599-3044|AAF57445.1|  726|Drosophila melanogaster CG11180-PA
           protein.
          Length = 726

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 256 VICPSDDKAHTSAEANGHVQNRTKVKRRTNDTSE*KKTKE 375
           VI   DD  H + E++   +NRTK K ++ D+ E  + +E
Sbjct: 470 VIVIDDDDLHRNNESHTSNENRTKNKSKSKDSQETTQIQE 509


>AE014134-3066|AAF53780.1|  335|Drosophila melanogaster CG17564-PB
           protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 326 KLKDEQTTQANKRRQKKWNSKVVRNRTPFQNLQRNRF 436
           KL++E  T A  +RQ K NS  VRN    Q   R RF
Sbjct: 66  KLQEEMLTSA--KRQTKLNSARVRNMYKIQERLRRRF 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,976,844
Number of Sequences: 53049
Number of extensions: 368752
Number of successful extensions: 1202
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)