Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d07
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103992-1|AAI03993.1|  195|Homo sapiens C1orf86 protein protein.      31   4.0  
AL590822-2|CAO72137.1|  195|Homo sapiens chromosome 1 open readi...    31   4.0  
AK055593-1|BAB70965.1|  195|Homo sapiens protein ( Homo sapiens ...    31   4.0  

>BC103992-1|AAI03993.1|  195|Homo sapiens C1orf86 protein protein.
          Length = 195

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 560 KKKICPGLSQLDVDSRTRRKMETETHSQTIISTHCNTI 673
           +K+  P L+QLDVDS   + +   T   T +S  C T+
Sbjct: 151 QKEFAPRLTQLDVDSHLAQCLAESTEDVTCLSWMCKTL 188


>AL590822-2|CAO72137.1|  195|Homo sapiens chromosome 1 open reading
           frame 86 protein.
          Length = 195

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 560 KKKICPGLSQLDVDSRTRRKMETETHSQTIISTHCNTI 673
           +K+  P L+QLDVDS   + +   T   T +S  C T+
Sbjct: 151 QKEFAPRLTQLDVDSHLAQCLAESTEDVTCLSWMCKTL 188


>AK055593-1|BAB70965.1|  195|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31031 fis, clone HSYRA1000148. ).
          Length = 195

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 560 KKKICPGLSQLDVDSRTRRKMETETHSQTIISTHCNTI 673
           +K+  P L+QLDVDS   + +   T   T +S  C T+
Sbjct: 151 QKEFAPRLTQLDVDSHLAQCLAESTEDVTCLSWMCKTL 188


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,584,927
Number of Sequences: 237096
Number of extensions: 1562650
Number of successful extensions: 3384
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3384
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)