Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d06
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.53 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.53 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.7  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +2

Query: 233 IKWQIRRPKVTPV-HLTVAQCFLRV 304
           +KWQ RR  +TP  H ++ Q F+ +
Sbjct: 128 LKWQTRRKILTPAFHFSILQQFVAI 152


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +2

Query: 233 IKWQIRRPKVTPV-HLTVAQCFLRV 304
           +KWQ RR  +TP  H ++ Q F+ +
Sbjct: 128 LKWQTRRKILTPAFHFSILQQFVAI 152


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription
          factor homolog protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 92 HYYDKIFNKKQ 60
          H+YDK+FN++Q
Sbjct: 2  HFYDKMFNQEQ 12


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 502 KIQALKKEKETLAHHYEREEE 564
           KI AL++E+ETL    +RE +
Sbjct: 345 KIVALRQEQETLKSQVQRESD 365


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 550 HSDVLMSLFLSLKPVF 503
           H D L +++ S+KPV+
Sbjct: 14  HHDTLHNIYTSMKPVY 29


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 550 HSDVLMSLFLSLKPVF 503
           H D L +++ S+KPV+
Sbjct: 14  HHDTLHNIYTSMKPVY 29


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = -2

Query: 208  PFARVTRTATKCQNSDLTINENYIFLREITIVFFLVISITITIK 77
            PF   T         ++ I++ Y+ L  I +VF    ++ + I+
Sbjct: 1298 PFGVKTNITYDESTQEVHISKEYLQLEPIGLVFVFFFALILVIQ 1341


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = -2

Query: 208  PFARVTRTATKCQNSDLTINENYIFLREITIVFFLVISITITIK 77
            PF   T         ++ I++ Y+ L  I +VF    ++ + I+
Sbjct: 1298 PFGVKTNITYDESTQEVHISKEYLQLEPIGLVFVFFFALILVIQ 1341


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 301 SEEALRHRQVNWSHFRTP 248
           + + + + + NWS+ RTP
Sbjct: 38  NSQMIDYSRPNWSYLRTP 55


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 301 SEEALRHRQVNWSHFRTP 248
           + + + + + NWS+ RTP
Sbjct: 58  NSQMIDYSRPNWSYLRTP 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,389
Number of Sequences: 336
Number of extensions: 2440
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)