Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6d06
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 38 0.007
07_01_0066 - 470595-470724,470877-471040,471552-471593,471730-47... 35 0.064
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766 34 0.084
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385... 34 0.11
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 33 0.15
09_02_0470 + 9629062-9629355,9629948-9630893,9630948-9631102,963... 33 0.15
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 33 0.26
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 33 0.26
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 32 0.45
02_01_0687 - 5118774-5119412,5120359-5120424,5120636-5120690,512... 32 0.45
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 0.59
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 0.59
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 31 1.0
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 31 1.0
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 31 1.0
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 31 1.0
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 30 1.8
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 30 1.8
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 30 1.8
03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512 30 1.8
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 29 2.4
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 29 2.4
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 29 2.4
03_05_0457 - 24506420-24506974,24507142-24508329,24509262-245093... 29 3.2
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 29 3.2
03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421 29 3.2
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 4.2
06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,706... 29 4.2
03_03_0168 - 15047383-15047847,15048085-15048192,15048313-150484... 29 4.2
03_03_0145 + 14833043-14833113,14833544-14833662,14833834-148339... 29 4.2
01_06_1261 - 35826513-35828941,35829201-35829294 29 4.2
08_01_0216 - 1717696-1718265,1718856-1720082,1720558-1720627,172... 28 5.5
07_03_0963 + 22949898-22949985,22950295-22950364,22951204-229512... 28 5.5
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 5.5
02_01_0683 - 5067432-5067944 28 5.5
12_01_0113 - 864380-865027,865419-866408,867128-867194,868377-86... 28 7.3
09_02_0358 + 7818189-7818368,7818786-7819067 28 7.3
06_02_0217 + 13170731-13170826,13170886-13171203 28 7.3
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 28 7.3
01_01_0319 - 2574583-2574675,2575853-2576055,2576140-2576364,257... 28 7.3
12_01_0593 + 4856934-4857053,4857145-4857271,4857931-4858136 27 9.7
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 27 9.7
04_01_0526 - 6901003-6901056,6901070-6901404,6901423-6901607,690... 27 9.7
03_02_0492 - 8861472-8861517,8862672-8862781,8862889-8863059,886... 27 9.7
02_04_0125 - 19982330-19982538,19983507-19983633,19983978-199840... 27 9.7
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 27 9.7
01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804... 27 9.7
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 37.9 bits (84), Expect = 0.007
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYIS-NT 492
++LQK I SL Q+N+ LK ++ + + E SL++A Q +AE+E +
Sbjct: 153 EKLQKEISSLSQENQELKKKISSVLENSDRAESEVASLKEALA--QQEAEKEAAFSQCQQ 210
Query: 493 LLKKIQALKKEKETLAHHYEREEECLTNDLSRKIKSVETR 612
++QALK E ++R +E + N L + + E R
Sbjct: 211 SSDRLQALKSEILQTQEEFKRLKEEMQNGL-ENLSTAEER 249
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 310 SRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISN 489
S+ +LQ ++ ++++NR L+ + ++ + LQ+E SL+ A ++ + + E
Sbjct: 340 SKVRLQNDLDKIREENRKLEEQNNSSISAIIRLQDEVISLKNAQRLLEEEVSRHVEE-KK 398
Query: 490 TLLKKIQALKKEK-ETLAHHYEREEE 564
L ++ LK +K ++ H+ +E+
Sbjct: 399 VLQYELSQLKDDKGDSERKHFSIKEQ 424
>07_01_0066 -
470595-470724,470877-471040,471552-471593,471730-471771,
472147-472246,472396-472460,473015-473101,473795-473873,
474490-474558,476290-476474
Length = 320
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 310 SRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENR-SLRQASVSIQAKAEQEEEYIS 486
S +LQK+ SLQ++N+ L+ EL + V+ Q+ + Q QA+ + + S
Sbjct: 202 SISELQKKERSLQEENKALQKELVERQKNVRGQQQVGQWDQTQVQAQAQAQPQAQTSSSS 261
Query: 487 NTLLKKIQAL 516
+++L+ QAL
Sbjct: 262 SSMLRDQQAL 271
>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
Length = 943
Score = 34.3 bits (75), Expect = 0.084
Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Frame = +1
Query: 289 MLPPSTVSRDQLQKRIESLQQQNRVL-KVELDTYKLRVKALQEENRSLRQASVSIQAKAE 465
+L +T + + ++ + ++ +L K+E+D +KA ++E + + +QAK
Sbjct: 640 LLAEATAKKAEEEEAAKGTEKSKVLLMKLEMDKLLGSLKAAEQEANAAKDDKAQLQAKLR 699
Query: 466 QEEEYISNTLL----KKIQALKKEKETLAHHYEREEECLTNDLSRKIKSVETRKVSS 624
E ++ L +KI +L+ KETLA E+EEE L+ ++R+ + TR+ ++
Sbjct: 700 LLESKMTEANLTAEEEKISSLRL-KETLA---EKEEELLS--IAREYDGLRTREAAA 750
>10_08_0614 -
19238064-19238132,19238381-19238407,19238436-19238510,
19238637-19239317,19239423-19239554,19239676-19239723,
19239828-19239878,19240015-19240134,19241121-19241261,
19241701-19241865,19241981-19242160,19242314-19242445,
19242536-19242643,19242779-19242883,19243217-19243321,
19243407-19243463,19243991-19244010,19244299-19244377,
19245021-19245080,19245562-19245615,19246535-19246600,
19246938-19246990,19247361-19247450,19248152-19248249,
19248348-19248721
Length = 1029
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 334 IESLQQQNRVLKVELDTYKLRVKALQEENRSL-RQASVSIQAKAEQEEEYISNTLLKKIQ 510
+E NRVL+ +L + + LQE+ L +Q + + +A EQ E+ + L K+Q
Sbjct: 685 LELRSADNRVLQEQLQQKNVEINELQEKVLRLEQQLTTNTEASPEQCTEHELHDLKSKLQ 744
Query: 511 ALKKEKETLAHHYEREEE 564
+ E E L + + + E
Sbjct: 745 LKEAESEKLKYEHMKITE 762
>09_04_0151 - 15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/112 (23%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Frame = +1
Query: 307 VSRDQLQKRI---ESLQQQNRV--LKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQE 471
+S+ +++K+I +SL Q++ + LK L++ + ++ +N + + +S ++E
Sbjct: 751 LSKLEMEKKILDEQSLDQKDELQRLKSSLESCEKAMEDCNIQNELEKDSILSELLTLQKE 810
Query: 472 EEYISNT-LLKKIQALKKEKETLAHHYEREEECLTNDLSRKIKSVETRKVSS 624
Y+S++ L+K+ ++++KE + + E L N + KIK +E+ K +
Sbjct: 811 VVYLSSSSLMKEKESIRKELDRTKTKLKETENKLKNSIQEKIK-LESEKAEA 861
>09_02_0470 +
9629062-9629355,9629948-9630893,9630948-9631102,
9631299-9631358,9633374-9633444,9633626-9633663,
9633824-9633876,9633970-9635235,9635632-9635672,
9636821-9636887
Length = 996
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 277 DGGAMLPPSTVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQA 456
D G + PS++ D Q R + Q+ +L VE +K+ ++A QE R + Q S IQ
Sbjct: 18 DAGRLKLPSSIDEDMAQVRRTLARLQDVLLSVEGKYFKMSMEA-QEWMRKINQISYDIQD 76
Query: 457 KAEQEEE 477
++ E+
Sbjct: 77 LLDEFED 83
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 319 QLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLL 498
+L+ +E Q KVE+ K R++ LQ E + RQA V +Q + E E + +S
Sbjct: 713 KLRSEVEEQLQSVLSKKVEISFEKNRIEKLQTEIENDRQAVVQLQYELEVERKALSMARA 772
Query: 499 KKIQALKKEKE 531
KK +E
Sbjct: 773 WAEDEAKKARE 783
>03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/113 (21%), Positives = 50/113 (44%)
Frame = +1
Query: 280 GGAMLPPSTVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAK 459
G A T ++++ +E +Q R+ L + + L+ + + Q ++Q K
Sbjct: 697 GPAKKQVDTAELQKVKQMLERAKQDIRLKDDSLRKLEDNCQNLENKAKGKEQFYKNLQEK 756
Query: 460 AEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSRKIKSVETRKV 618
++ E + + + +I + K++ E E+EE C T L +KI K+
Sbjct: 757 VKELESQLDSKMHSQITSEKQQNELFGKLKEKEEMCTT--LQQKIAEESEHKL 807
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +1
Query: 334 IESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQA 513
+ L +Q ++ VE+D K+ + +LQEE + L Q V+ A++E E N KI+
Sbjct: 444 VVELHRQLKIKMVEIDMLKMTINSLQEERKKL-QDDVARGTGAKRELEAARN----KIKE 498
Query: 514 LKKEKETLAHHYEREEECLTNDL 582
L+++ + A+ + + L N +
Sbjct: 499 LQRQIQMEANQTKGQLMLLKNQV 521
>02_01_0687 -
5118774-5119412,5120359-5120424,5120636-5120690,
5120795-5121354
Length = 439
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 295 PPSTVSRDQLQKR--IESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQ 468
PP + + + +R ++ L +N L + D+ + + A Q+E + L+ + A EQ
Sbjct: 46 PPEILEQKLMAQRGELQKLAVENDRLAMSHDSLRKELAAAQQEAQRLQAQGQAAMAAEEQ 105
Query: 469 EEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSRKIKSVETRKVS 621
E I + + K LK A + E ++R+ + +T+K+S
Sbjct: 106 EARGILDKVAKMEADLKARDPVKAELQQAHAEAQGLVVARQQLAADTQKLS 156
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +1
Query: 334 IESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQ 510
+ L +Q ++ VE+D K+ + +LQEE + L Q V+ A++E E N +K++Q
Sbjct: 139 VVELHRQLKIKMVEIDMLKMTINSLQEERKKL-QDDVARGTGAKRELEAARNK-IKELQ 195
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 31.5 bits (68), Expect = 0.59
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +1
Query: 322 LQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLK 501
L+ IESL N +K E++ ++V LQE+ S+ + K E+ I + +
Sbjct: 1177 LESEIESLTHVNEAMKQEINAKLVKVDELQEKLSSISSEKEEVAEKVVVHEKTIEHLREE 1236
Query: 502 KIQALKKEKETLAHHYEREEE 564
+ L+ + + E E E
Sbjct: 1237 HSRGLELQSAAESRSAEIENE 1257
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +1
Query: 274 LDGGAMLPPSTVSRD-QLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSI 450
L+GG L V +D L++ ++ ++Q V +LD K ++ L+++ +AS+ +
Sbjct: 198 LEGGDSL--EAVGKDGPLKQELDVAREQYVVALADLDAAKQELRKLKKDF----EASLDM 251
Query: 451 Q-AKAEQEEE--YISNTLLKKIQALKKEKETL 537
+ A A+QEEE +++ T +K L+KE T+
Sbjct: 252 RLAAAQQEEESLHLAETNKQKADQLRKEIATI 283
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 30.7 bits (66), Expect = 1.0
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 301 STVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEY 480
ST +D+LQ+R+E+ ++Q E D LR Q E L A +I AK
Sbjct: 161 STQRKDELQRRLEATRRQQ-----EADAAALRSMVAQLEEARLELAD-AIDAKNLALSH- 213
Query: 481 ISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSRKIK--SVETRKVSS*TNI 636
++ ++ +A + E L R ++ ++L K+K + +TRK+ + T++
Sbjct: 214 -ADDAIRAGEANAAQVELLNAEINRLKDSFNSELESKVKESAEKTRKLEAETSV 266
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 346 QQQNRVLKVELDTYKLRVKALQEEN--RSLRQASVSIQAKAEQEEEYISNTLLKKIQALK 519
Q+++ + ++ K +K + +E+ RS++ + ++ E+E+ +NT+LK LK
Sbjct: 600 QKEDMFMSIKEKENKAELKKIADEDAARSIKDKAEIMRLMKEKEDG--NNTILK----LK 653
Query: 520 KEKETLAHHYEREEEC 567
KE ETL Y EE C
Sbjct: 654 KESETLRSSY--EESC 667
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 328 KRIESLQQQNRVLKVELDTYKLRVKALQE-ENRSLRQASVSIQAKAEQEEEYISNTLLKK 504
+ ++ Q Q E DT K + + +E + + +A + Q K +QEE L ++
Sbjct: 316 ENVDDSQLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEE-----ALREQ 370
Query: 505 IQALKKEKETLAHHYEREEECLTNDLSRKIKSVETRK 615
+ K+E E ++EEE R+ + ETRK
Sbjct: 371 KRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRK 407
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/90 (22%), Positives = 42/90 (46%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTL 495
D+ KR+ L+ + + +LD V+ L+ EN +R + + A + E +
Sbjct: 374 DETMKRLTQLENELKKKSGQLDRSNATVQKLEMENAEIRAEMEAAKLSASESERQCQKLV 433
Query: 496 LKKIQALKKEKETLAHHYEREEECLTNDLS 585
K+ KK+ + L ++R++ L D++
Sbjct: 434 KKE----KKDSKRL-EMWDRQKAKLQEDIA 458
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Frame = +1
Query: 337 ESLQQQNRVLKVELDTYKLRVKALQ-------EENRS-------LRQASVSIQAKAEQEE 474
E ++ QN ++K D Y ++KAL+ EEN+ +++ I+ K + E
Sbjct: 234 EHIRSQNVIIKTREDKYHSKIKALEILVNGTNEENQMAINRLQIIKEEKSKIEEKRKLGE 293
Query: 475 EYISNTLLKK------IQALKKEKETLAHHYERE-------EECLTNDLSRKIKSVETRK 615
+ ++ + +K I +LKKE E + +E++ + + L+ KIK VE+
Sbjct: 294 QDVARLMKEKEISENTIASLKKEMEVMTSMHEQQLQKIELTAKQMEEHLTTKIKEVESLL 353
Query: 616 VSS 624
V S
Sbjct: 354 VQS 356
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTL 495
D+L + I + L+ ++ + + +L+ EN+ LRQ S+ A A+ ++ +L
Sbjct: 1254 DELSREILEKDSKLNQLQEMIERLETNLSSLESENQVLRQQ--SLLASADDDKSKQIESL 1311
Query: 496 LKKIQALKKEKETL 537
KI L+ E + L
Sbjct: 1312 ESKIAILESENQLL 1325
>03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512
Length = 957
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = +1
Query: 343 LQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKK 522
L+ + + D + LQE+ +++ ++ Q E++ EY L+++ L
Sbjct: 615 LENERSAAAIAADETMAMINRLQEQKAAMQMEAIQYQRLMEEQSEY-DQDALERLNELVV 673
Query: 523 EKETLAHHYEREEE 564
++E ERE E
Sbjct: 674 KREKEKQDLERELE 687
>10_08_0961 +
21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 415 ENRSLRQASVSIQAKAEQEE-EYISNTLLKKIQALKKEKETLAHHYER-EEECLTNDLSR 588
+N+ R + +A A +EE +Y+ L KKI+ L +EK+ L + +EC +
Sbjct: 404 DNQMNRSKDAASEALALREEADYLRTLLAKKIETLDQEKQELQFIVDMLGKECSESRAIS 463
Query: 589 KIKSVETR 612
+I+ E R
Sbjct: 464 EIEESENR 471
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Frame = +1
Query: 337 ESLQQQNRVLKVELDTYKL-RVKALQEENRSLRQASVSIQAKAEQEE-EYISNTLLKKIQ 510
E +Q+ ++ + K+ + K L+ EN S++ QA + QEE E + ++++
Sbjct: 948 EHTEQEEKINRAHFMLNKIEKEKTLEVENLEREVMSLTAQASSTQEERENATVEAIREVS 1007
Query: 511 ALKKEKETLA----------HHYEREEECLTNDLSRKIKSV 603
L+ +K L HYE + E L + KIK +
Sbjct: 1008 VLRADKVKLEASLQDVSAQLRHYESQLEDLRKESKSKIKGL 1048
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/98 (23%), Positives = 50/98 (51%)
Frame = +1
Query: 319 QLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLL 498
+L+K +ESL +QNR + +L ++ L++E SL + +Q + + IS
Sbjct: 611 ELKKEVESLTEQNR-------SSELLIQELRDEINSLTDSRNELQNEIQSLRSTISQLNT 663
Query: 499 KKIQALKKEKETLAHHYEREEECLTNDLSRKIKSVETR 612
+K AL + ++++ + E + L L +++ +E +
Sbjct: 664 EKDAALFQHQQSVERVSDLESQLL--KLQPELEEIEQK 699
>03_05_0457 -
24506420-24506974,24507142-24508329,24509262-24509331,
24510627-24510704,24511088-24511149
Length = 650
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 349 QQNRVLKVELDTYKLRVKALQEENRSLRQ 435
++N+VLKV +D ++R+ L++E ++RQ
Sbjct: 556 RENQVLKVGMDNMRMRLSELEKECSTMRQ 584
>03_05_0432 - 24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSI------QAKAEQEEE 477
D+L+ ++ +++ +NR LKV+L+ + +LQ E +L + ++S+ K EE
Sbjct: 1089 DELKDKLNAVEIENRRLKVDLNGDFTVLGSLQNEVSALEKQTLSLANDCLQSNKLRMEEN 1148
Query: 478 YISNTLLK 501
+S +LK
Sbjct: 1149 ALSTQVLK 1156
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTL 495
++LQK +ESL ++N+ LK + + + + E L++A A+ E+E I
Sbjct: 121 ERLQKELESLSEENKDLKSRISSLLEQTNKAELEVVCLKEA----LAQQNTEKEAIVLQC 176
Query: 496 LKKIQALKKEKETLAHHYER 555
+ L+ K + H E+
Sbjct: 177 QQSTARLQNLKSEILHTQEK 196
>03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421
Length = 927
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/82 (20%), Positives = 34/82 (41%)
Frame = +1
Query: 313 RDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNT 492
R L L+++ + + + LQEE +++ ++ Q E++ EY
Sbjct: 570 RKALSALYSELEEERSAAAIATNQTMAMINRLQEEKAAMQMEALQYQRMMEEQSEY-DQE 628
Query: 493 LLKKIQALKKEKETLAHHYERE 558
L+ + L ++E ERE
Sbjct: 629 ALQLLNELVTKREREKQELERE 650
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +1
Query: 307 VSRDQLQKRIESLQQQNRVLKVELDTYKLRV--KALQEENRSLRQASVSIQAKAEQEEEY 480
V D+ + +ES+ RVLK + D +L+V L+E+ LR ++ +
Sbjct: 1405 VGTDKSRDIVESIDSSERVLKYQDDILQLKVLLTNLEEQVDDLRSTKDEVEILNMVLKSK 1464
Query: 481 ISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSRKIKSVETRKVS 621
+ + + L+ LA+ E+ ++ + +K+ E + +S
Sbjct: 1465 LEEQRTEILSLLQNSGHELANFKEQNKDLTQKLAEQTLKAEEFKNLS 1511
>06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,
7063557-7064432,7064457-7064660,7065039-7065143,
7065407-7065496,7066066-7066176,7066349-7066780
Length = 1586
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/83 (20%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 286 AMLPPSTVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAE 465
A+L + + +R+ +Q++ + + + A +E + +Q I+AKA+
Sbjct: 763 AVLERRKILEAEKMQRLAEIQRKKEEAIIRREEERKASSAAREARAAEQQRRKEIRAKAQ 822
Query: 466 QEE-EYISNTLLKKIQALKKEKE 531
QEE E ++ L +K++ ++ ++
Sbjct: 823 QEEAELLAQKLAEKLRESEQRRK 845
>03_03_0168 -
15047383-15047847,15048085-15048192,15048313-15048464,
15048555-15048752,15049553-15050856,15051281-15051354,
15051458-15051492,15052853-15053015
Length = 832
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 364 LKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKE 531
LK EL +L VK L++E +R+ SIQ++ E+EEE N ++ A + E
Sbjct: 101 LKDELRKRRLPVKGLKDE--LVRRLFESIQSEKEEEEEEQDNETVEVNPAANQASE 154
>03_03_0145 +
14833043-14833113,14833544-14833662,14833834-14833991,
14834147-14834587
Length = 262
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 307 VSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQ 453
+ RD L + ++SL+Q+N L+ E + + LQ+EN +LR +Q
Sbjct: 92 ILRDLLSQ-VKSLRQENSTLQNESNYVTMERNELQDENGALRSEISDLQ 139
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAK 459
D+LQKR++SL+ + L + R+K ++E +++++ S+ ++
Sbjct: 360 DELQKRLDSLEDEKAALIEDSSKLSERLKQVEEVLQTIQRIGKSVHSE 407
>08_01_0216 -
1717696-1718265,1718856-1720082,1720558-1720627,
1721579-1721602,1722073-1722140
Length = 652
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 274 LDGGAMLPPSTVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLR 432
L+GG+ T+S +Q + ++N+ L+ +D K RV L++E ++R
Sbjct: 529 LEGGSRQLIPTISGEQYRPGWPLASRENQALREGMDNMKQRVADLEKECSTMR 581
>07_03_0963 +
22949898-22949985,22950295-22950364,22951204-22951270,
22951361-22951456,22951796-22951893,22951921-22952089,
22952899-22952940,22953967-22954023,22954116-22954166,
22954284-22954340,22954522-22954539
Length = 270
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 292 LPPSTVSR-DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQ 468
+PP T R +L K + L ++ +V + ++ E+ + L + +V A+
Sbjct: 187 VPPLTSDRRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVK-DLSADL 245
Query: 469 EEEYISNTLLKKIQALKKEKE 531
++ +++ +KKI+A++K+KE
Sbjct: 246 QK--VTDEYMKKIEAIQKQKE 264
>03_02_0568 +
9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 397 VKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTN 576
++++ E+N+ A A E E +SN + K I L KE LA +++E
Sbjct: 515 LESMNEQNKIYFSAKSEFLAVMVSEAEQVSNDVFKSISEL---KELLAFSADQQEVMFKR 571
Query: 577 DL 582
DL
Sbjct: 572 DL 573
>02_01_0683 - 5067432-5067944
Length = 170
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQ 468
D+L ++ L+ N+ L VEL+ + + EN LR+ + +Q K +
Sbjct: 98 DELSSQVSELRDTNQRLLVELNHMISKHARIVRENSQLREEASDLQRKLSE 148
>12_01_0113 -
864380-865027,865419-866408,867128-867194,868377-868468
Length = 598
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 274 LDGGAMLPPSTVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQ 435
+ GG+ + S VS + L+++NR LK+E+ ++R+ L+ E +RQ
Sbjct: 464 MTGGSGVASSCVSPQR--DNYACLRRENRELKLEIARMRVRLTELEREQGVMRQ 515
>09_02_0358 + 7818189-7818368,7818786-7819067
Length = 153
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAK 459
D+L ++ L+ QN+ L + L + A+Q +N L+ + +Q++
Sbjct: 55 DELTSQVNQLKNQNQQLSMALSLTTQNLVAVQAQNSVLQTQELELQSR 102
>06_02_0217 + 13170731-13170826,13170886-13171203
Length = 137
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 322 LQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLK 501
L KRI+ + + R + VE +LR+ + + S + V+ + + EEY + T +
Sbjct: 61 LMKRIKKRKIETRQIVVEETRNELRINKIIKSEESDIEIEVNTDDEENKAEEYEAWT-NR 119
Query: 502 KIQALKKEKE 531
+I K++KE
Sbjct: 120 EIARTKRDKE 129
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 445 SIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEE 564
SI+A+ E+ + +LK + LK+EKE +AH+ E
Sbjct: 214 SIKAQTWILEDSCPDYMLKAEECLKREKERVAHYLHSSSE 253
>01_01_0319 -
2574583-2574675,2575853-2576055,2576140-2576364,
2576590-2576603,2577146-2577210
Length = 199
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 328 KRIESLQQQNRVLKVELDTYKLRVK 402
K IESL++QN LK E++ YK K
Sbjct: 147 KDIESLKKQNDELKAEIEYYKKTTK 171
>12_01_0593 + 4856934-4857053,4857145-4857271,4857931-4858136
Length = 150
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/96 (18%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = +1
Query: 319 QLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQ--ASVSIQAKAEQEEEYISNT 492
+L++R+++LQ + + E+D + L EN++L+Q S+S + ++ ++ +
Sbjct: 31 ELERRVQALQTEGVEVSAEMDFLGQQNIMLDLENKALKQRLESLSQEHLIKRFQQEMFER 90
Query: 493 LLKKIQALKKEKETLAHHYEREEECLTNDLSRKIKS 600
+ ++++L ++++ H +++ + SR + S
Sbjct: 91 EIGRLRSLFQQQQQQQHIPQQQGPTHSRSNSRDLDS 126
>05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 27.5 bits (58), Expect = 9.7
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Frame = +1
Query: 304 TVSRDQLQKRIESLQQQN-------RVLKVELDTYKLRVKALQEENRSLRQASVSI---- 450
T D ++ +E L Q+N R+ ++E V L EE+ ++A+++
Sbjct: 1157 TAQADSDKRNLEVLMQKNAKKADHLRLAELEQQKADGNVLRLVEEHNREKEATLNSNMRL 1216
Query: 451 --QAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSRKIKSV 603
Q +Q+ E L K+Q K + T E+ E LTN+L KI+ +
Sbjct: 1217 HEQLDRKQKLELEIAHLKGKLQVTKHTQGTEDSDLEKTIEALTNELEEKIEDM 1269
>04_01_0526 -
6901003-6901056,6901070-6901404,6901423-6901607,
6902201-6904641
Length = 1004
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 304 TVSRDQLQKRIESLQQQNRV-LKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEY 480
T R +K I Q ++ L ++ TYK KA + L + + K + E+E
Sbjct: 487 TYCRIATKKNIPLSQASSKSQLPLKTFTYKELEKATAGFHEILGAGASGVVYKGQLEDEL 546
Query: 481 ISNTLLKKIQALKKEKE 531
+N +KKI L+ E E
Sbjct: 547 KTNIAVKKIDKLQPETE 563
>03_02_0492 -
8861472-8861517,8862672-8862781,8862889-8863059,
8863158-8863262,8863342-8863431,8863719-8863813,
8863933-8864101,8864193-8864345,8864562-8864639,
8864883-8864957,8865076-8865098,8865181-8865268,
8865397-8865432
Length = 412
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 334 IESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQA 513
+E L+ + L +E+D+ ++ L EEN +L + A Q E + + LK+ +
Sbjct: 256 VERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKD-CLKQNEE 314
Query: 514 LKKEKETL 537
L+ E L
Sbjct: 315 LRSHLEKL 322
>02_04_0125 -
19982330-19982538,19983507-19983633,19983978-19984053,
19984993-19985184,19985906-19986474
Length = 390
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 322 LQKRIESLQQQNRVLKVELDT-YKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLL 498
L++ ++SLQ L V + + ++LR AL EN+ LR+ S+Q +A+ ++ + L
Sbjct: 271 LERTVDSLQNIGADLAVRVASLFQLR-NALSMENKQLRRQITSLQ-QAKLIKDGQTQMLK 328
Query: 499 KKIQALKK 522
K+ + LK+
Sbjct: 329 KETERLKQ 336
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = +1
Query: 316 DQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTL 495
+Q ++I +Q+ N L++ + + +QE+ ++V + K E++ + ISN L
Sbjct: 750 EQKFEQISVMQKNNEELELANSNLQNELAMVQEQKNEAVASTVELGNKLEEQNQQISN-L 808
Query: 496 LKKIQALKKEK 528
+ ++ L+ K
Sbjct: 809 QEAVENLEAAK 819
>01_05_0491 -
22680011-22680125,22680210-22680307,22680392-22680472,
22680564-22680677,22680757-22680823,22680947-22681017,
22681099-22681236,22681324-22681530,22681630-22681773,
22681856-22682017,22682117-22682173,22682256-22682348,
22682425-22682542,22682678-22682817,22683031-22683590,
22683703-22683805
Length = 755
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 277 DGGAMLPPSTVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSI 450
D + + + ++L + + + +NR L+ L +++ L+EEN+ LR A S+
Sbjct: 233 DAKKAVAEAELRNEKLARLLGVEEVKNRQLQESLKRMEMKASDLEEENQKLRGAVASV 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,068,799
Number of Sequences: 37544
Number of extensions: 212206
Number of successful extensions: 756
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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