Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d01
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   5.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   5.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   5.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.4  

>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 664 CCRVRDVHTEGSRKV 620
           C +  D H EG RKV
Sbjct: 70  CAKCNDKHKEGIRKV 84


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 421 AVEAMTDRVCTYSNG 465
           AV+A TD+ C Y+ G
Sbjct: 42  AVDAATDKSCRYTAG 56


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 421 AVEAMTDRVCTYSNG 465
           AV+A TD+ C Y+ G
Sbjct: 101 AVDAATDKSCRYTAG 115


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 421 AVEAMTDRVCTYSNG 465
           AV+A TD+ C Y+ G
Sbjct: 42  AVDAATDKSCRYTAG 56


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 421 AVEAMTDRVCTYSNG 465
           AV+A TD+ C Y+ G
Sbjct: 101 AVDAATDKSCRYTAG 115


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +2

Query: 29  TRPFVKKSVITEKQKKCLFRVRRMLRWCAFLQRPKTYRIHSPMNSSTR 172
           T+P   K   T      L  + R      +L RP+  +I   +N S R
Sbjct: 83  TKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSER 130


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +2

Query: 29  TRPFVKKSVITEKQKKCLFRVRRMLRWCAFLQRPKTYRIHSPMNSSTR 172
           T+P   K   T      L  + R      +L RP+  +I   +N S R
Sbjct: 74  TKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSER 121


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 346  DKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSN 462
            D+W     +  VRD+        FG   A T  +  +SN
Sbjct: 936  DQWVGFEDIKSVRDKAEYIKTKGFGGAVAWTIDLDDFSN 974


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 109 VCVLAAAKDL-PHPLSDEFINTINLKQNSWKA 201
           + V   +K L P P++  F+  + LK+N++ A
Sbjct: 149 LAVKTTSKSLVPTPVTHIFLQNLILKENTYDA 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,089
Number of Sequences: 336
Number of extensions: 3788
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)