Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c23
         (630 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2QUC0 Cluster: Contig An09c0150, complete genome; n=1;...    35   1.4  
UniRef50_A5CSX9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_A7PM52 Cluster: Chromosome chr14 scaffold_21, whole gen...    33   4.3  
UniRef50_UPI0000D8EB09 Cluster: Cysteine-rich BMP regulator 2.; ...    33   7.5  
UniRef50_Q83GA5 Cluster: ABC transporter ATP-binding protein; n=...    32   9.9  
UniRef50_A0V6P3 Cluster: Binding-protein-dependent transport sys...    32   9.9  

>UniRef50_A2QUC0 Cluster: Contig An09c0150, complete genome; n=1;
           Aspergillus niger|Rep: Contig An09c0150, complete genome
           - Aspergillus niger
          Length = 916

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 620 TPAAPQPIARRSHLKQLLKRLPIEPVLQAIEHRDATTIASTSQR 489
           TP A  P+AR  HL  L + L    VL +++H D  +I   SQ+
Sbjct: 81  TPLAVDPVARERHLTHLQRLLERPNVLTSVKHTDDLSIIDDSQK 124


>UniRef50_A5CSX9 Cluster: Putative uncharacterized protein; n=1;
           Clavibacter michiganensis subsp. michiganensis NCPPB
           382|Rep: Putative uncharacterized protein - Clavibacter
           michiganensis subsp. michiganensis (strain NCPPB 382)
          Length = 149

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
 Frame = +2

Query: 332 QPVELELDDDDVTQKLSNVSFARRITKPTIRLVIGNGKSSAFLTAVTSLLLLIAVM---- 499
           +PV ++   D     L++ + A R+T   + + +  G++ A + A+ SL LLIAV     
Sbjct: 74  KPVPVDAAGDRNITDLTDGA-ASRVTIDVLGIPLNPGQAGALVAAILSLPLLIAVAVLVL 132

Query: 500 --SKQSWWRRGAR 532
              ++ WWRR AR
Sbjct: 133 SPRRRRWWRRVAR 145


>UniRef50_A7PM52 Cluster: Chromosome chr14 scaffold_21, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr14 scaffold_21, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 517

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +2

Query: 359 DDVTQKLSNVSFARRITKPTIRLVIGNGKSSAFLTAVTSLLLLIAVMSKQSWWRR 523
           DDV  K++N+ F R + + T+R +  NG+S      +  L+    V   + W+ R
Sbjct: 463 DDVVDKVTNMGFPRDVVRATVRKLTENGQSVDLNVVLDKLMNDGEVQPPRGWFGR 517


>UniRef50_UPI0000D8EB09 Cluster: Cysteine-rich BMP regulator 2.;
           n=3; Danio rerio|Rep: Cysteine-rich BMP regulator 2. -
           Danio rerio
          Length = 658

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 460 QKCTG--FSISNNKPDRGLRNSSSETDVTQFLRDVIVVQL*LDWL 332
           Q C G  FS+  +  DRG +  S   +VT F+ DV V+QL  DW+
Sbjct: 354 QDCEGGDFSVHVSNEDRGRKGVSWTKEVTVFIGDV-VIQLYQDWI 397


>UniRef50_Q83GA5 Cluster: ABC transporter ATP-binding protein; n=2;
           Tropheryma whipplei|Rep: ABC transporter ATP-binding
           protein - Tropheryma whipplei (strain Twist) (Whipple's
           bacillus)
          Length = 515

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 220 CRYHKRGRREFACRSNQDACSSGSPAGSF 306
           C +  RGR +++C  N+D  +  SP GSF
Sbjct: 333 CMHDSRGRCQYSCGMNRDILTHTSPCGSF 361


>UniRef50_A0V6P3 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=6;
           Proteobacteria|Rep: Binding-protein-dependent transport
           systems inner membrane component - Delftia acidovorans
           SPH-1
          Length = 579

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 23/80 (28%), Positives = 36/80 (45%)
 Frame = +2

Query: 272 MRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARRITKPTIRLVIGNGKSS 451
           M A  V  L  ++ +C  A Q V + L++   +      S  RR+  P +   I  G  +
Sbjct: 445 MLAYAVRRLPYALRSCMAALQQVHISLEEAAQSLGAGRTSVIRRVMVPLMAGGILAGFVT 504

Query: 452 AFLTAVTSLLLLIAVMSKQS 511
           +F+TA   L   I + S QS
Sbjct: 505 SFITAAVELSATIMLASAQS 524


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,355,009
Number of Sequences: 1657284
Number of extensions: 11106353
Number of successful extensions: 31956
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31952
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)