Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c20
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450 pr...    25   1.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   1.5  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    25   2.6  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    25   2.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.6  

>AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450
           protein.
          Length = 107

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 360 LPIKTHKIDLIASLPENFDP 419
           LP  TH+++ I   PE FDP
Sbjct: 9   LPYATHRLEHIYPDPERFDP 28


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 230  GEWMR*VFGRCKNAHQRNIRRTRNKHFF 147
            GEW +  F +CK+A      R+ +  FF
Sbjct: 1810 GEWAKDEFDKCKDAIDAQYERSLSSGFF 1837


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 485 TTATRPLISDFIQRWTVR 432
           TT T P ++D +Q+W  R
Sbjct: 179 TTETEPSLADLVQKWLER 196


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 485 TTATRPLISDFIQRWTVR 432
           TT T P ++D +Q+W  R
Sbjct: 179 TTETEPSLADLVQKWLER 196


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 397 VCRKTSIPETNGLTVQR*MKSEIKGLVA 480
           V +K ++  T    +QR   SE++GLVA
Sbjct: 115 VSKKVAVVATGSYPIQRVWGSELRGLVA 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,239
Number of Sequences: 2352
Number of extensions: 13494
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)