Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c17
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ...    33   0.24 
Z93379-8|CAC35812.2|  354|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF067219-6|AAC17030.1|  382|Caenorhabditis elegans Innexin prote...    28   6.8  
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        27   9.1  

>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
           protein F56H1.3 protein.
          Length = 1174

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -3

Query: 588 ISQNKLNLKVYSTDTFSIFQSCFGLVLLLKL*YTHYDFLFICRLMEL 448
           I+QNKL++K       ++F   F LVLLL   + ++  + +CR++EL
Sbjct: 23  INQNKLSIKDKFKKKLTMFSIPFALVLLL---FENFTIIVLCRIIEL 66


>Z93379-8|CAC35812.2|  354|Caenorhabditis elegans Hypothetical
           protein F21H7.11 protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 265 IKSLKKNVIFLYLCISCVCFNILLFSLRKISLLPNRISIKQ 387
           + S+ + +  + + IS VC  + LF  R  SLL NR  I +
Sbjct: 104 VPSIVQLIFGVIIAISAVCSYVYLFESRSSSLLQNRFRISR 144


>AF067219-6|AAC17030.1|  382|Caenorhabditis elegans Innexin protein
           15 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 571 QFKSIFY*HLFYLPELFWSSL 509
           QF  +F   LFYLP L+WS++
Sbjct: 103 QFILVFLAFLFYLPYLYWSTV 123


>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
            F29G6.3c protein.
          Length = 1453

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 198  FSNYSTRAA*CSTLNVPTTATLRTIEHSQKHI 103
            F+NYS++A      +    A +R++EH QKH+
Sbjct: 1082 FANYSSKAPQLPREHHYYPAPVRSVEHHQKHV 1113


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
            F29G6.3b protein.
          Length = 1785

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 198  FSNYSTRAA*CSTLNVPTTATLRTIEHSQKHI 103
            F+NYS++A      +    A +R++EH QKH+
Sbjct: 1082 FANYSSKAPQLPREHHYYPAPVRSVEHHQKHV 1113


>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 541 FYLPELFWSSLVTKIIIHTLR 479
           FYLP +FWS L TK  I+ ++
Sbjct: 112 FYLPVIFWSMLSTKSGINIIK 132


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 541 FYLPELFWSSLVTKIIIHTLR 479
           FYLP +FWS L TK  I+ ++
Sbjct: 112 FYLPVIFWSMLSTKSGINIIK 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,675,630
Number of Sequences: 27780
Number of extensions: 265864
Number of successful extensions: 602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)