Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c16
         (191 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   0.37 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   3.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    19   6.1  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 0.37
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 106 NALLRAICDSSFXIMLI 156
           NALL AIC S+F  + I
Sbjct: 351 NALLFAICGSAFSYLFI 367


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 58  NLFFLNIFXIECLANCNALLRAICDSSFXIML 153
           N  F  I  I CL   N ++ A C   + I +
Sbjct: 531 NRIFGFIIIIGCLIQFNTIVFAFCYCYYSISI 562


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 106 NALLRAICDSSFXIMLI 156
           NALL +IC +S   + I
Sbjct: 417 NALLLSICGASSSYLFI 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,934
Number of Sequences: 336
Number of extensions: 418
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 43
effective length of database: 108,137
effective search space used:  2162740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)