Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c16
         (191 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1082|AAF52374.2| 1196|Drosophila melanogaster CG9506-PA...    26   6.3  
Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin acti...    26   8.4  

>AE014134-1082|AAF52374.2| 1196|Drosophila melanogaster CG9506-PA
            protein.
          Length = 1196

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 43   ESLQPNLFFLNIFXIECLANCNALLRAICDS 135
            E L+  ++FL+ +   CLANC+  +  I D+
Sbjct: 1157 EQLESFMYFLSEYADVCLANCSEHMDKILDT 1187


>Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin
           activating enzyme protein.
          Length = 1008

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 136 KNRKLHAKAHCNLRDIQXKIYLKKTS*AVRTQSIACLQ 23
           K+  LH  A C L D+  + YL +   A      +C Q
Sbjct: 59  KSITLHDTATCGLHDLSSQFYLTEADIAKNRAEASCAQ 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,322,364
Number of Sequences: 53049
Number of extensions: 72132
Number of successful extensions: 82
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 24,988,368
effective HSP length: 43
effective length of database: 22,707,261
effective search space used: 454145220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)