Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c14
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   4.1  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   4.1  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   4.1  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   9.5  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 17  INIYKGVSTTGGTYFLTLNKPSN 85
           + + KG++  G T  LT+++PS+
Sbjct: 283 LQVLKGMAMKGKTIILTIHQPSS 305


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 17  INIYKGVSTTGGTYFLTLNKPSN 85
           + + KG++  G T  LT+++PS+
Sbjct: 283 LQVLKGMAMKGKTIILTIHQPSS 305


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 17  INIYKGVSTTGGTYFLTLNKPSN 85
           + + KG++  G T  LT+++PS+
Sbjct: 261 LQVLKGMAMKGKTIILTIHQPSS 283


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 83  NRTIHNAEFIST*QRTMLQSHHHFVT 160
           N TIH  ++I T   T+ +  + F+T
Sbjct: 42  NTTIHGLKYIGTVSLTLCERAYFFLT 67


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 83  NRTIHNAEFIST*QRTMLQSHHHFVT 160
           N TIH  ++I T   T+ +  + F+T
Sbjct: 42  NTTIHGLKYIGTVSLTLCERAYFFLT 67


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 368  NRFLAWRRMQVTAFLIFLFFFPG 300
            NRF  W RM+  A L F    PG
Sbjct: 1733 NRFQVWPRMEEGAHLSFKVPPPG 1755


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,151
Number of Sequences: 2352
Number of extensions: 12115
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)