Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c12
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   3.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   3.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   3.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   4.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   5.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   5.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  LMKRDLWYLIITES*RQNYHHHHRRSQHFVDLVAS 171
           L K+ LW+ ++        H++ R   H+   VAS
Sbjct: 87  LTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVAS 121


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  LMKRDLWYLIITES*RQNYHHHHRRSQHFVDLVAS 171
           L K+ LW+ ++        H++ R   H+   VAS
Sbjct: 87  LTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVAS 121


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 249 LAIS*RHCQSILFVICQCT 305
           L +   +C  +LFV C C+
Sbjct: 285 LLVDSTYCLFLLFVFCDCS 303


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 249 LAIS*RHCQSILFVICQCT 305
           L +   +C  +LFV C C+
Sbjct: 285 LLVDSTYCLFLLFVFCDCS 303


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 249 LAIS*RHCQSILFVICQCT 305
           L +   +C  +LFV C C+
Sbjct: 285 LLVDSTYCLFLLFVFCDCS 303


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 332 TVKFALITLGTLTNNE*NRL 273
           TVK A+I  GT TN++  R+
Sbjct: 263 TVKVAVIYGGTSTNHQRGRI 282


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 230 NFLVEIISHKLTSLSIYFIRYLS 298
           N+L  ++    TSLS+Y +  +S
Sbjct: 188 NYLTIVLGETWTSLSVYHLVEIS 210


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 230 NFLVEIISHKLTSLSIYFIRYLS 298
           N+L  ++    TSLS+Y +  +S
Sbjct: 184 NYLTIVLGETWTSLSVYHLVEIS 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,466
Number of Sequences: 336
Number of extensions: 1326
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)