BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6c12
(374 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 0.93
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 1.6
EF427621-5|ABO09853.1| 62|Anopheles gambiae tal-like protein A... 23 3.7
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 5.0
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 5.0
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 22 8.7
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 22 8.7
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 22 8.7
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 22 8.7
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 22 8.7
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 22 8.7
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.0 bits (52), Expect = 0.93
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 124 HHHHRRSQHFVDLVASI 174
HHHHR H DL + +
Sbjct: 492 HHHHRAGLHHHDLASGV 508
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1
Query: 124 HHHHRRSQH 150
HHHH QH
Sbjct: 283 HHHHHHHQH 291
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/46 (21%), Positives = 27/46 (58%)
Frame = -3
Query: 216 RTILKHNLLKILAFYGRDQIYEVLAPAVVMMVILSLALCYYQVPQV 79
R I KH + + ++ Q +E + ++M+ ++L++ +Y+ P++
Sbjct: 1157 RYIPKHRIQYKVWWFVTSQPFEYMIFVLIMINTITLSMKFYRQPEI 1202
>EF427621-5|ABO09853.1| 62|Anopheles gambiae tal-like protein AA
protein.
Length = 62
Score = 23.0 bits (47), Expect = 3.7
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 100 TES*RQNYHHHHRRSQH 150
+ S R +HHHH++ Q+
Sbjct: 19 SSSQRSPFHHHHQQQQN 35
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 22.6 bits (46), Expect = 5.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 115 QNYHHHHRRSQH 150
Q++HHHH H
Sbjct: 182 QHHHHHHHHHPH 193
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 22.6 bits (46), Expect = 5.0
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 118 NYHHHHRRSQHFVDL-VASIKR 180
++HHH + HFV+ +IKR
Sbjct: 660 HHHHHQNPNDHFVNTNTDTIKR 681
Score = 22.2 bits (45), Expect = 6.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 112 RQNYHHHHRRSQH 150
+Q+ HHHH H
Sbjct: 651 QQHQHHHHHHHHH 663
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1
Query: 124 HHHHRRSQH 150
HHHH QH
Sbjct: 283 HHHHHHHQH 291
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1
Query: 124 HHHHRRSQH 150
HHHH QH
Sbjct: 235 HHHHHHHQH 243
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 112 RQNYHHHHRRSQ 147
+Q +HHHH + Q
Sbjct: 782 QQQHHHHHLQQQ 793
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 268 IVNLFYSLFVNVPNVIK 318
IVNL YS +V + +VIK
Sbjct: 377 IVNLSYSAYVVLKDVIK 393
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = +1
Query: 64 HLMKRDLWYLIITES*RQNYHHH 132
H+ + D W ++ + YH+H
Sbjct: 1285 HIEQHDYWSALVYPFASETYHYH 1307
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/11 (54%), Positives = 6/11 (54%)
Frame = +1
Query: 118 NYHHHHRRSQH 150
N HHHH H
Sbjct: 120 NLHHHHHHHHH 130
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,845
Number of Sequences: 2352
Number of extensions: 5164
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -