Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6c06
         (137 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4GXF3 Cluster: Ribosomal protein L22e; n=1; Cicindela ...    35   0.40 
UniRef50_P47198 Cluster: 60S ribosomal protein L22; n=58; Eukary...    32   2.2  
UniRef50_P35268 Cluster: 60S ribosomal protein L22; n=42; Eukary...    32   2.2  
UniRef50_P50887 Cluster: 60S ribosomal protein L22; n=9; Endopte...    32   2.2  
UniRef50_P52865 Cluster: 60S ribosomal protein L22; n=4; Coeloma...    32   2.8  
UniRef50_Q5I0R6 Cluster: Ribosomal protein L22-like 1; n=4; Xeno...    32   2.8  
UniRef50_Q6P5R6 Cluster: Ribosomal protein L22-like 1; n=28; Fun...    32   2.8  
UniRef50_UPI00015556FB Cluster: PREDICTED: similar to vomeronasa...    30   8.7  

>UniRef50_Q4GXF3 Cluster: Ribosomal protein L22e; n=1; Cicindela
           campestris|Rep: Ribosomal protein L22e - Cicindela
           campestris (Green tiger beetle)
          Length = 162

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   WLRVVASAHDAYELRYF 51
           WLRVVAS  D+YELRYF
Sbjct: 132 WLRVVASGKDSYELRYF 148


>UniRef50_P47198 Cluster: 60S ribosomal protein L22; n=58;
           Eukaryota|Rep: 60S ribosomal protein L22 - Rattus
           norvegicus (Rat)
          Length = 128

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +1

Query: 1   WLRVVASAHDAYELRYF 51
           WLRVVA++ ++YELRYF
Sbjct: 99  WLRVVANSKESYELRYF 115


>UniRef50_P35268 Cluster: 60S ribosomal protein L22; n=42;
           Eukaryota|Rep: 60S ribosomal protein L22 - Homo sapiens
           (Human)
          Length = 128

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +1

Query: 1   WLRVVASAHDAYELRYF 51
           WLRVVA++ ++YELRYF
Sbjct: 99  WLRVVANSKESYELRYF 115


>UniRef50_P50887 Cluster: 60S ribosomal protein L22; n=9;
           Endopterygota|Rep: 60S ribosomal protein L22 -
           Drosophila melanogaster (Fruit fly)
          Length = 299

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   WLRVVASAHDAYELRYF 51
           W+RVVA+  D+YELRYF
Sbjct: 270 WIRVVANEKDSYELRYF 286


>UniRef50_P52865 Cluster: 60S ribosomal protein L22; n=4;
           Coelomata|Rep: 60S ribosomal protein L22 - Gadus morhua
           (Atlantic cod)
          Length = 125

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   WLRVVASAHDAYELRYF 51
           WLRVVA+  ++YELRYF
Sbjct: 96  WLRVVANTKESYELRYF 112


>UniRef50_Q5I0R6 Cluster: Ribosomal protein L22-like 1; n=4;
           Xenopus|Rep: Ribosomal protein L22-like 1 - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis)
          Length = 120

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +1

Query: 1   WLRVVASAHDAYELRYF 51
           WLRVVAS  + YELRYF
Sbjct: 92  WLRVVASDKETYELRYF 108


>UniRef50_Q6P5R6 Cluster: Ribosomal protein L22-like 1; n=28;
           Fungi/Metazoa group|Rep: Ribosomal protein L22-like 1 -
           Homo sapiens (Human)
          Length = 122

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +1

Query: 1   WLRVVASAHDAYELRYF 51
           WLRVVAS  + YELRYF
Sbjct: 93  WLRVVASDKETYELRYF 109


>UniRef50_UPI00015556FB Cluster: PREDICTED: similar to vomeronasal
           receptor V1RJ2, partial; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to vomeronasal receptor
           V1RJ2, partial - Ornithorhynchus anatinus
          Length = 371

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 129 LDCVKLFYCMNSLILIVFVIAVSVDVEVAQFVSVMSGGHHS 7
           + C   FYC+NS I +        D +V   V+ + GG+ S
Sbjct: 289 VSCFVCFYCINSSITVYLNFMKKEDFQVYDIVAFLGGGYAS 329


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,664,634
Number of Sequences: 1657284
Number of extensions: 890273
Number of successful extensions: 1746
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 575,637,011
effective HSP length: 26
effective length of database: 532,547,627
effective search space used: 10118404913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)