Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6c03
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 193 1e-49
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 193 1e-49
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 193 1e-49
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 193 1e-49
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 36 0.042
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 32 0.52
AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical ... 29 3.7
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 193 bits (471), Expect = 1e-49
Identities = 93/202 (46%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Frame = +3
Query: 168 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYYCTDESKKVYP-CGIREF 344
IP DILD+L RFI N+ + + +R+CF +ELAHW+Y+D+ D+ P G R+F
Sbjct: 149 IPTDILDELEFRFISNMVECEINDNIRVCFHLELAHWYYIDHMVEDDKISGCPNVGSRDF 208
Query: 345 AAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYWTKA-SW 521
+ QH LR++ D VL +REYK TVPTYGAI HV+LVQSY+ K +W
Sbjct: 209 NFQMCQHCRVLRKYAHRADEVLAKFREYKSTVPTYGAILVDPEMDHVVLVQSYFAKGKNW 268
Query: 522 GFPKGKVNEDEEPWKCATREVLEETGFDISNLINKNDYIEAVTHDQIARLYIIGNIPRDT 701
GFPKGK+N+ E P A RE EETGFD K + +D + RLY++ N+P+D
Sbjct: 269 GFPKGKINQAEPPRDAAIRETFEETGFDFGIYSEKEKKFQRFINDGMVRLYLVKNVPKDF 328
Query: 702 KFQPRTRNEIKACEWFPLADLP 767
FQP+TR EI+ EWF + DLP
Sbjct: 329 NFQPQTRKEIRKIEWFKIDDLP 350
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 193 bits (471), Expect = 1e-49
Identities = 93/202 (46%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Frame = +3
Query: 168 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYYCTDESKKVYP-CGIREF 344
IP DILD+L RFI N+ + + +R+CF +ELAHW+Y+D+ D+ P G R+F
Sbjct: 172 IPTDILDELEFRFISNMVECEINDNIRVCFHLELAHWYYIDHMVEDDKISGCPNVGSRDF 231
Query: 345 AAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYWTKA-SW 521
+ QH LR++ D VL +REYK TVPTYGAI HV+LVQSY+ K +W
Sbjct: 232 NFQMCQHCRVLRKYAHRADEVLAKFREYKSTVPTYGAILVDPEMDHVVLVQSYFAKGKNW 291
Query: 522 GFPKGKVNEDEEPWKCATREVLEETGFDISNLINKNDYIEAVTHDQIARLYIIGNIPRDT 701
GFPKGK+N+ E P A RE EETGFD K + +D + RLY++ N+P+D
Sbjct: 292 GFPKGKINQAEPPRDAAIRETFEETGFDFGIYSEKEKKFQRFINDGMVRLYLVKNVPKDF 351
Query: 702 KFQPRTRNEIKACEWFPLADLP 767
FQP+TR EI+ EWF + DLP
Sbjct: 352 NFQPQTRKEIRKIEWFKIDDLP 373
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 193 bits (471), Expect = 1e-49
Identities = 93/202 (46%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Frame = +3
Query: 168 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYYCTDESKKVYP-CGIREF 344
IP DILD+L RFI N+ + + +R+CF +ELAHW+Y+D+ D+ P G R+F
Sbjct: 133 IPTDILDELEFRFISNMVECEINDNIRVCFHLELAHWYYIDHMVEDDKISGCPNVGSRDF 192
Query: 345 AAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYWTKA-SW 521
+ QH LR++ D VL +REYK TVPTYGAI HV+LVQSY+ K +W
Sbjct: 193 NFQMCQHCRVLRKYAHRADEVLAKFREYKSTVPTYGAILVDPEMDHVVLVQSYFAKGKNW 252
Query: 522 GFPKGKVNEDEEPWKCATREVLEETGFDISNLINKNDYIEAVTHDQIARLYIIGNIPRDT 701
GFPKGK+N+ E P A RE EETGFD K + +D + RLY++ N+P+D
Sbjct: 253 GFPKGKINQAEPPRDAAIRETFEETGFDFGIYSEKEKKFQRFINDGMVRLYLVKNVPKDF 312
Query: 702 KFQPRTRNEIKACEWFPLADLP 767
FQP+TR EI+ EWF + DLP
Sbjct: 313 NFQPQTRKEIRKIEWFKIDDLP 334
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 193 bits (471), Expect = 1e-49
Identities = 93/202 (46%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Frame = +3
Query: 168 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYYCTDESKKVYP-CGIREF 344
IP DILD+L RFI N+ + + +R+CF +ELAHW+Y+D+ D+ P G R+F
Sbjct: 149 IPTDILDELEFRFISNMVECEINDNIRVCFHLELAHWYYIDHMVEDDKISGCPNVGSRDF 208
Query: 345 AAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYWTKA-SW 521
+ QH LR++ D VL +REYK TVPTYGAI HV+LVQSY+ K +W
Sbjct: 209 NFQMCQHCRVLRKYAHRADEVLAKFREYKSTVPTYGAILVDPEMDHVVLVQSYFAKGKNW 268
Query: 522 GFPKGKVNEDEEPWKCATREVLEETGFDISNLINKNDYIEAVTHDQIARLYIIGNIPRDT 701
GFPKGK+N+ E P A RE EETGFD K + +D + RLY++ N+P+D
Sbjct: 269 GFPKGKINQAEPPRDAAIRETFEETGFDFGIYSEKEKKFQRFINDGMVRLYLVKNVPKDF 328
Query: 702 KFQPRTRNEIKACEWFPLADLP 767
FQP+TR EI+ EWF + DLP
Sbjct: 329 NFQPQTRKEIRKIEWFKIDDLP 350
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 193 bits (471), Expect = 1e-49
Identities = 93/202 (46%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Frame = +3
Query: 168 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYYCTDESKKVYP-CGIREF 344
IP DILD+L RFI N+ + + +R+CF +ELAHW+Y+D+ D+ P G R+F
Sbjct: 172 IPTDILDELEFRFISNMVECEINDNIRVCFHLELAHWYYIDHMVEDDKISGCPNVGSRDF 231
Query: 345 AAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYWTKA-SW 521
+ QH LR++ D VL +REYK TVPTYGAI HV+LVQSY+ K +W
Sbjct: 232 NFQMCQHCRVLRKYAHRADEVLAKFREYKSTVPTYGAILVDPEMDHVVLVQSYFAKGKNW 291
Query: 522 GFPKGKVNEDEEPWKCATREVLEETGFDISNLINKNDYIEAVTHDQIARLYIIGNIPRDT 701
GFPKGK+N+ E P A RE EETGFD K + +D + RLY++ N+P+D
Sbjct: 292 GFPKGKINQAEPPRDAAIRETFEETGFDFGIYSEKEKKFQRFINDGMVRLYLVKNVPKDF 351
Query: 702 KFQPRTRNEIKACEWFPLADLP 767
FQP+TR EI+ EWF + DLP
Sbjct: 352 NFQPQTRKEIRKIEWFKIDDLP 373
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 35.5 bits (78), Expect = 0.042
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 486 LLVQSYWTKASWGFPKGKVNEDEEPWKCATREVLEETGFDISNLINKNDYIEAVTHD 656
LL+Q+ + W PKG V+ E+ W+ A RE EE L D E + ++
Sbjct: 21 LLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYE 77
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.52
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Frame = +3
Query: 477 SHVLLVQSYWT--KASWGFPKGKVNEDEEPWKCATREVLEETGF--DISNLINKNDYIEA 644
+ VLL+Q + W P G+V E + REV EETG+ D+ L++ ++
Sbjct: 88 TEVLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKEETGYSCDVVELLS----LQV 143
Query: 645 VTHDQIARLYIIGNIPRDTKFQPRTRNEIKACEWFPLADLPA 770
+ D K +P E A EW+ + DL A
Sbjct: 144 QGSGWYRYAFYCNITGGDLKTEP--DQESLAAEWYNIKDLKA 183
>AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical
protein Y92H12BL.5 protein.
Length = 150
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 483 VLLVQSYWTKASWGFPKGKVNEDEEPWKCATREVLEETG 599
VLLV W P G + +DE + A RE++EE G
Sbjct: 41 VLLVSGGKDGGKWVVPGGGIEKDECAEEAAHRELMEEAG 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,099
Number of Sequences: 27780
Number of extensions: 379898
Number of successful extensions: 1104
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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