Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6c01
(689 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 122 3e-28
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 122 4e-28
01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 118 4e-27
05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 116 2e-26
02_02_0521 - 11156594-11156956,11157097-11157483,11158327-111583... 101 5e-22
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 86 2e-17
06_02_0097 + 11710560-11710859,11712605-11713270 86 3e-17
01_01_0147 - 1332752-1333447,1333557-1333739 81 1e-15
01_06_0794 + 32050413-32050523,32050663-32051391 79 3e-15
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 75 5e-14
05_01_0380 + 2978256-2979284 72 4e-13
05_01_0382 + 2985526-2986659 70 2e-12
05_01_0379 + 2975701-2976831 67 1e-11
01_01_0137 + 1249081-1249341,1249500-1250237 66 2e-11
01_01_0145 + 1327172-1327362,1327491-1328169 61 7e-10
01_01_0138 + 1253256-1253534,1253625-1254359 57 1e-08
05_01_0381 + 2981762-2982075,2982302-2982658,2982752-2982800 45 7e-05
01_01_0162 - 1394980-1395760,1396024-1396037 40 0.002
01_01_0159 + 1380421-1381143 33 0.16
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 33 0.28
05_05_0173 + 22956927-22958615 32 0.37
05_04_0275 - 19650555-19650625,19650927-19651221,19651593-196518... 32 0.37
01_06_1819 + 40110697-40110721,40110818-40110828,40111228-401115... 32 0.37
08_01_0413 - 3679887-3681254 32 0.49
09_04_0088 + 14494711-14494931,14496309-14496399,14496496-144965... 31 0.65
01_06_1224 - 35508842-35510404 31 0.65
01_05_0686 - 24277812-24277909,24278029-24278081,24278227-242783... 26 1.1
11_06_0508 - 24407544-24408138,24408350-24408564 30 1.5
02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504 30 1.5
11_06_0010 + 19235419-19236450 30 2.0
03_05_1059 - 30020877-30021539,30022367-30022375 30 2.0
03_02_0534 - 9267297-9267734,9268376-9268649,9268782-9268889,926... 25 3.3
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 29 3.5
02_05_0084 - 25690346-25691206 29 3.5
12_02_1243 + 27300978-27301682 29 4.6
07_03_0311 + 16597023-16597220,16598100-16598222,16598410-165984... 29 4.6
03_05_0677 + 26663880-26664581 29 4.6
01_06_1720 + 39421381-39421444,39422424-39422601,39422812-394229... 29 4.6
11_06_0109 + 20202629-20205452,20206354-20206578,20207208-202080... 28 6.1
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 28 6.1
07_01_1116 + 10308029-10308111,10308575-10308737,10308996-103090... 28 6.1
05_03_0414 + 13650483-13651388,13651559-13651657 28 6.1
02_01_0006 - 42752-43816 28 6.1
04_01_0600 + 7907142-7908047,7908218-7908316 28 8.0
>02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688
Length = 308
Score = 122 bits (294), Expect = 3e-28
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKL-SCCPTCRGPLGNIRNLAMEKVASNVMF 510
L ECPVC + + PPILQC +GH +CS+C+ ++ + CPTCR LGNIR LA+EKVA ++
Sbjct: 57 LLECPVCTNSMRPPILQCPNGHTICSNCKHRVENHCPTCRQELGNIRCLALEKVAESLQL 116
Query: 509 PCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGA 399
PCK+ + GC + K +HEE C FRPYSCP G+
Sbjct: 117 PCKYQSLGCAEIHPYQNKLKHEELCRFRPYSCPYAGS 153
>07_03_1564 +
27749899-27750166,27750431-27750507,27750923-27750950,
27751117-27751261,27751351-27751429,27751515-27751633,
27751732-27752073,27754807-27754896,27755730-27755955,
27756398-27756784,27757176-27757496
Length = 693
Score = 122 bits (293), Expect = 4e-28
Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKL-SCCPTCRGPLGNIRNLAMEKVASNVMF 510
L ECPVC + + PPI QC +GH +CS C+P++ + CPTCR LGNIR LA+EKVA+++
Sbjct: 442 LLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLEL 501
Query: 509 PCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASISRIYDLYY 369
PCK+ N GC + K +HE C++RPY+CP G+ + D+ Y
Sbjct: 502 PCKYQNFGCLGIYPYYCKLKHESQCQYRPYTCPYAGSECTVAGDIQY 548
>01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251
Length = 347
Score = 118 bits (284), Expect = 4e-27
Identities = 50/107 (46%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKL-SCCPTCRGPLGNIRNLAMEKVASNVMF 510
L ECPVC + + PPI QCQ+GH +CS+C+ ++ + CPTCR LG+IR LA+EKVA ++
Sbjct: 83 LLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 142
Query: 509 PCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASISRIYDLYY 369
PCK+ + GC + K +HE C FRPY+CP G+ + + D+ Y
Sbjct: 143 PCKYCSLGCPEIFPYYSKIKHEAQCMFRPYNCPYAGSECAVVGDIPY 189
>05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118
Length = 361
Score = 116 bits (279), Expect = 2e-26
Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKL-SCCPTCRGPLGNIRNLAMEKVASNVMF 510
L ECPVC + + PPI QCQ+GH +CS+C+ ++ + CPTCR LG+IR LA+EKVA ++
Sbjct: 97 LLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 156
Query: 509 PCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASISRIYDL 375
PCK+ + GC + K +HE C FRPY+CP G+ + D+
Sbjct: 157 PCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDI 201
>02_02_0521 -
11156594-11156956,11157097-11157483,11158327-11158383,
11159671-11159970
Length = 368
Score = 101 bits (242), Expect = 5e-22
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 20/124 (16%)
Frame = -1
Query: 686 LFECPVCFDYVLPPI-------------------LQCQSGHLVCSSCRPKL-SCCPTCRG 567
L ECPVC + + PPI L+CQ+GH +CS+C+ ++ + CPTCR
Sbjct: 84 LLECPVCTNSMYPPIHQLGHWEPEELPSMLSVILLECQNGHTLCSTCKTRVHNRCPTCRQ 143
Query: 566 PLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASISR 387
LG+IR LA+EKVA ++ PCK+ + GC + K +HE C FRPY+CP G+ S
Sbjct: 144 ELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSV 203
Query: 386 IYDL 375
+ D+
Sbjct: 204 VGDI 207
>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
Length = 417
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGP----LGNIRNLAMEKVASN 519
+ CPVCF + PP+ QC GHLVCS CR L C P ++R +AME+V ++
Sbjct: 36 VLHCPVCFQILRPPVFQCDLGHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVNS 95
Query: 518 VMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASIS 390
V C ++ GC + + EHE+ C P CP PG +
Sbjct: 96 VEVACAYAEHGCPDKIAYANITEHEKTCPHAPCFCPEPGCGFA 138
>06_02_0097 + 11710560-11710859,11712605-11713270
Length = 321
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSC-CPTCRGPLGNIRNLAMEKVASNVMF 510
+ +C +CF+ + PP+ QCQ+GH+ C SC KLS C C RN+A+EK+ ++
Sbjct: 84 VLDCSICFESLRPPLYQCQNGHVACFSCWSKLSNKCHICSRDAKFARNIALEKIVESIKS 143
Query: 509 PCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCP 411
C ++ GC + + ++ HEEAC F P CP
Sbjct: 144 SCSYAKWGCCKFINYAQRDAHEEACLFAPSVCP 176
>01_01_0147 - 1332752-1333447,1333557-1333739
Length = 292
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSCRPKL-SCCPTCRGPLGNIRNLAMEKVASNVMFPC 504
ECP+CF + C++GH C SC K+ + CP C P+GNIR +EKV + + PC
Sbjct: 47 ECPICFVPFEDRVYMCKNGHAACGSCYAKMNTMCPCCIEPIGNIRCRPLEKVLAAMSAPC 106
Query: 503 KHSN---------TGCTVTLVHTEKAEHEEACEFRPYSCPCPGAS 396
+ S +GCT + +TE+ HE +C P CP G +
Sbjct: 107 RFSTSAYMRLIRASGCTEIVAYTERRNHEASCPHAPCVCPFDGCN 151
>01_06_0794 + 32050413-32050523,32050663-32051391
Length = 279
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKL---SCCPTCRGPLGNIRNLAMEKVASNV 516
+ +C VC + PP+LQC GH++CSSC KL + C C R A+E++ ++
Sbjct: 21 VLDCTVCCHPLKPPVLQCGVGHVICSSCHGKLPDKNRCHVCAMDTAYNRCFAVEQILRSI 80
Query: 515 MFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASIS 390
+ PC+++ GC + + HE+ C P CP PG +
Sbjct: 81 LVPCRNAGYGCDAKTAYHDSDSHEDGCPHAPCFCPEPGCGFA 122
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQC-QSGHLVCSSCRPKLSC-CPTCRGPLGNI-RNLAMEKVASNV 516
+ EC VCF + PP+ QC + GH+ CS+C ++ C CR P R AME + +
Sbjct: 50 VLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRCRAMEHFLAAL 109
Query: 515 MFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASIS 390
PC ++ GC + + E+ HE AC P CP G S S
Sbjct: 110 AVPCSFNHKGCAAMVPYGEREAHEAACAHSPCYCPIRGCSSS 151
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/96 (31%), Positives = 45/96 (46%)
Frame = -1
Query: 689 SLFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMF 510
+L C C + PP+ +C H+VCS CR C G ++ + +
Sbjct: 389 ALLHCHACLQPLKPPVFKCDEAHIVCSGCRCGHHG-QLCGGAAVYSHCAELDAIVATAKV 447
Query: 509 PCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPG 402
PC H+ GC+ +V+ A+H+ AC P SCP PG
Sbjct: 448 PCAHAPYGCSSYVVYAGVADHQRACPCAPCSCPEPG 483
>05_01_0380 + 2978256-2979284
Length = 342
Score = 72.1 bits (169), Expect = 4e-13
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSCRPKLS---CCPTCRGPL--GNIRN-LAMEKVASN 519
EC VCF + PPI QC+ GH+VCS CR KL+ C CR + G R A+E++
Sbjct: 74 ECGVCFLPLRPPIFQCEVGHVVCSPCRDKLAPAGRCHVCRVAVAGGEYRRCYALERLVDA 133
Query: 518 VMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPG 402
+ C H+ GC T + H AC P C CPG
Sbjct: 134 IRVACPHAAHGCGATPAYHALDAHRRACPHAP--CHCPG 170
>05_01_0382 + 2985526-2986659
Length = 377
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSCRPKLS---CCPTCRGPL--GNIRNL-AMEKVASN 519
EC VC + PPI QC+ GH+VC+ CR KL+ C CR + G R A+E++
Sbjct: 125 ECGVCCLPLRPPIFQCEVGHVVCAPCRDKLAPAGRCHVCRAAVAGGEYRRCHALERLVDA 184
Query: 518 VMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGAS 396
+ C H+ GC T + H AC P C CPG S
Sbjct: 185 IRVACPHAAHGCGATPAYHALDAHRRACPHAP--CRCPGES 223
>05_01_0379 + 2975701-2976831
Length = 376
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSCRPKLS---CCPTCRGPL--GNIRN-LAMEKVASN 519
EC VCF + PPI QC+ GH+VC+ CR L+ C CR + G R A+E++
Sbjct: 124 ECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYRRCYALERLVDA 183
Query: 518 VMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPG 402
+ C H+ GC + + H AC P C CPG
Sbjct: 184 IRVACPHAAHGCAARPAYHDVEAHRLACPHGP--CHCPG 220
>01_01_0137 + 1249081-1249341,1249500-1250237
Length = 332
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/95 (31%), Positives = 43/95 (45%)
Frame = -1
Query: 686 LFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFP 507
L C C + PP+ +C++ H+VCS CR CR ++ +
Sbjct: 71 LLHCHACLLPLKPPVFKCEAAHVVCSGCRGNHG--QLCRRAAAYAHCAELDAIVGAAKVA 128
Query: 506 CKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPG 402
C H+ GC +V+ AEH+ AC P SCP PG
Sbjct: 129 CAHAPYGCDSYVVYGAAAEHQRACPCAPCSCPDPG 163
>01_01_0145 + 1327172-1327362,1327491-1328169
Length = 289
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = -1
Query: 584 CPTCRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCP 405
CP+C P+G+IR +EKV + + PCK +GC T+ TE+ HE +C P CP
Sbjct: 84 CPSCNEPIGDIRCRPLEKVLAAMSAPCKFRASGCMETVGFTERLSHEASCTHAPCGCPFD 143
Query: 404 GAS 396
G +
Sbjct: 144 GCT 146
>01_01_0138 + 1253256-1253534,1253625-1254359
Length = 337
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = -1
Query: 689 SLFECPVCFDYVLPPILQCQSGHLVCSSCRPKL--SCCPTCRGPLGN---IRNLAMEKVA 525
++ CP+C + PP QC +GHL CSSC + C TC G G R ++
Sbjct: 76 AVLHCPLCLLPLKPPTYQCAAGHLACSSCHGDVPGKKCHTCGGGGGGGVYARCPGLDTFL 135
Query: 524 SNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCP 405
C + GC + + + A H+ AC P SC P
Sbjct: 136 RAAKILCPNDLFGCRSYVAYHDVAAHQRACPHAPCSCSEP 175
>05_01_0381 + 2981762-2982075,2982302-2982658,2982752-2982800
Length = 239
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSCRPKLS 588
EC VC + PP+ QC+ GH+VCS CR KL+
Sbjct: 67 ECGVCRLPLRPPVFQCEDGHVVCSPCRDKLA 97
>01_01_0162 - 1394980-1395760,1396024-1396037
Length = 264
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 611 SSCRPKL---SCCPTCRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEE 441
SSC KL S C C G R +A++ + + PC ++ GC + + H
Sbjct: 11 SSCHGKLLDTSRCHMCSRDGGYRRCVAVDHILYAITVPCPNAAHGCAARTPYHDSHGHAA 70
Query: 440 ACEFRPYSCPCPGASIS 390
C P CP PG +
Sbjct: 71 GCPHAPCFCPEPGCGFA 87
>01_01_0159 + 1380421-1381143
Length = 240
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = -1
Query: 575 CRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGAS 396
C G R +A++ + + PC ++ GC + + H C P CP PG
Sbjct: 2 CSRDGGYRRCVAVDHILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEPGCG 61
Query: 395 IS 390
+
Sbjct: 62 FA 63
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -1
Query: 683 FECPVCFDYV-LPPILQCQSGHLVCSSC-RPKLSC---CPTCRGPLG 558
F CPVC + + P C GH+ C C + L CPTCR LG
Sbjct: 317 FTCPVCLNKLDKPSTTNC--GHIFCEKCIQAWLKAQKKCPTCRKSLG 361
>05_05_0173 + 22956927-22958615
Length = 562
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Frame = -1
Query: 689 SLFECPVCFDYVLPPILQCQSGHLVCSSC-------RPKLSCCPTCRGPL--GNI 552
++FEC +CF+ P++ GHL C C CP C+G + GNI
Sbjct: 234 AMFECNICFEMASEPVV-TSCGHLFCWPCLYQWLHVHSTHKECPVCKGEVTEGNI 287
>05_04_0275 -
19650555-19650625,19650927-19651221,19651593-19651895,
19651978-19652182,19652266-19652501,19652619-19652816,
19653785-19653907,19654227-19654514,19654618-19654794,
19655580-19655915,19656753-19656863,19656977-19657227,
19657431-19657566
Length = 909
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = -1
Query: 581 PTCRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPG 402
P CRG GN+RN+ ++K + CK S +VH +HE+A + G
Sbjct: 34 PRCRGLPGNVRNV-LDKFFVGL---CKKS-------MVHYSSCKHEQAVTIDVNAWTDAG 82
Query: 401 ASISRIYDLYY 369
+++ +YD+ Y
Sbjct: 83 HAVNHLYDMLY 93
>01_06_1819 +
40110697-40110721,40110818-40110828,40111228-40111572,
40111707-40111782,40113605-40113771,40113818-40114036
Length = 280
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 683 FECPVCFDYVLPPILQCQSGHLVCSSC-RPKLSC---CPTCRGPL 561
F CPVC + ++ P GH+ C C + + CPTCR L
Sbjct: 223 FNCPVCMNELVEP-SSTICGHIFCKQCIKASIQAQKKCPTCRRKL 266
>08_01_0413 - 3679887-3681254
Length = 455
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Frame = -1
Query: 683 FECPVCFDYVLPPILQCQSGHLVCSSC-------RPKLSCCPTCRG 567
FEC +CF+ P++ GHL C C + S CP C+G
Sbjct: 239 FECNICFESAKDPVV-TPCGHLFCWPCIYQWLHGHSEHSDCPVCKG 283
>09_04_0088 +
14494711-14494931,14496309-14496399,14496496-14496571,
14496671-14496755,14497381-14497450,14499111-14499316,
14499434-14499508,14501043-14501133,14501400-14501441,
14501661-14501741,14502010-14502089,14502254-14502365
Length = 409
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 677 CPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGN 555
C +CF+ + +L +++C +C K CP CR + N
Sbjct: 351 CRICFERDICIVLLPCRHYVLCEACSDKCRSCPICRVSIEN 391
>01_06_1224 - 35508842-35510404
Length = 520
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = -1
Query: 683 FECPVCFDYVLPPILQCQSGHLVCSSCRPK-LSC------CPTCRG 567
FEC +CFD P++ GHL C C + L+ CP C+G
Sbjct: 192 FECNICFDMASEPVV-TSCGHLFCWPCLYQWLNVYSNHKECPVCKG 236
>01_05_0686 -
24277812-24277909,24278029-24278081,24278227-24278309,
24278353-24278401,24278466-24278514,24279455-24280418
Length = 431
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 614 CSSCRPKLSC-CPTCRGPLGN 555
CS C+ + CP CRGP+ +
Sbjct: 117 CSECQQPIKLSCPLCRGPVSH 137
Score = 23.0 bits (47), Expect(2) = 1.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 677 CPVCFDYVLPPILQCQSGHLVCSSCRP 597
CPVC D+ +L S H CRP
Sbjct: 56 CPVCMDHPHNAVLLVCSSHE--KGCRP 80
>11_06_0508 - 24407544-24408138,24408350-24408564
Length = 269
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 679 SVPFASTMC---CPPSYSVRVGTWCALAAVPSCPAARRVAGPSEIFATLQWKRL 527
++PF MC CP +S+ G C+ V CP + +G S + + WK +
Sbjct: 205 NLPFLQIMCLSGCPILHSIPEGLTCSDIIVEYCPNFKEPSGMSSVLCS--WKAM 256
>02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504
Length = 681
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 579 DVSRAPRKYSQPCNGKGC 526
D+ +AP QPCNG GC
Sbjct: 166 DIEKAPIAIGQPCNGNGC 183
>11_06_0010 + 19235419-19236450
Length = 343
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 644 ILQCQSGHL-VCSSCRPKLSCCPTC 573
+L C+ HL +C +C PKL CP C
Sbjct: 308 LLPCR--HLCLCKACEPKLDACPVC 330
>03_05_1059 - 30020877-30021539,30022367-30022375
Length = 223
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 668 CFDYVLPPILQCQSGHL-VCSSCRPKLSCCPTCRGPLGNIRN 546
C YV + C GH +C+ C + CP CR P+ + N
Sbjct: 35 CGRYVQHVLNSC--GHASLCAECSQRCDVCPICRSPIPDTGN 74
>03_02_0534 -
9267297-9267734,9268376-9268649,9268782-9268889,
9269476-9269567,9269652-9269711,9269812-9269994
Length = 384
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 677 CPVCFDYVLP-PILQCQSGHLVCSSCRPKLSC 585
C +CF+ + +C GH +C++C L C
Sbjct: 250 CSICFEQACTIEVREC--GHQMCAACTLALCC 279
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 605 CRPKLSCCPTCRGPLGNI 552
C+ L CP CRG + +
Sbjct: 291 CQQPLPTCPFCRGGISRL 308
>04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSC------RPKLSCCPTCRGPL 561
ECP+C + + H +C C P CP CR P+
Sbjct: 895 ECPICLESASDDPVLTPCAHRMCRECLLSSWRTPSGGPCPLCRSPI 940
>02_05_0084 - 25690346-25691206
Length = 286
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 683 FECPVCFDYVLPPILQCQSGHLVCSSC 603
F+C +C D+ P++ GHL C C
Sbjct: 49 FDCNICLDFATEPVVTL-CGHLYCWPC 74
>12_02_1243 + 27300978-27301682
Length = 234
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 683 FECPVCFDYVLPPILQCQSGHLVCSSC 603
FEC +CF+ PI+ GHL C C
Sbjct: 23 FECNICFELPQEPIVTL-CGHLFCWPC 48
>07_03_0311 +
16597023-16597220,16598100-16598222,16598410-16598448,
16599063-16599288,16599456-16599466
Length = 198
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 504 TGEHNITGNLFHCKVANISEGPATRRAAGQLG 599
T H T +HC N+ P T++A Q+G
Sbjct: 72 TPYHEYTAVQYHCASQNLDTNPGTKQAPNQVG 103
>03_05_0677 + 26663880-26664581
Length = 233
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 683 FECPVCFDYVLPPILQCQSGHLVCSSC 603
FEC +CF+ PI+ GHL C C
Sbjct: 22 FECNICFELPQEPIVTL-CGHLFCWPC 47
>01_06_1720 +
39421381-39421444,39422424-39422601,39422812-39422980,
39423101-39423170,39423259-39423487,39425130-39425340
Length = 306
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSCR----PKLSCCPTCRGPLGNIRN 546
EC +C + +L H +C +C + CP CRG L +R+
Sbjct: 209 ECGICLETCTKMVLP-NCNHAMCINCYRDWYTRSQSCPFCRGSLKRVRS 256
>11_06_0109 +
20202629-20205452,20206354-20206578,20207208-20208091,
20208692-20208814
Length = 1351
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 320 KKHFFGLLSFEQLYLNYSTSHIYV--RWMP 403
+KHF L S E +YL Y++ I V W+P
Sbjct: 482 EKHFAHLASLESIYLPYNSLEIVVDPEWLP 511
>07_03_1696 - 28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 677 CPVCFDYVLPPILQCQSGHLVCSSC 603
CP+C + + + Q GH VC C
Sbjct: 1216 CPICQEKIFDQKMVFQCGHFVCCKC 1240
>07_01_1116 +
10308029-10308111,10308575-10308737,10308996-10309062,
10309120-10309375,10309658-10309781,10310039-10310077
Length = 243
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = -1
Query: 680 ECPVCFDYVLPPILQCQSGHLVCSSCRP----KLSCCPTCRGPLGNIRN 546
EC +C + +L H +C C + CP CRG L IR+
Sbjct: 162 ECGICMETCTKMVLP-NCSHAMCIKCYRDWYRRSESCPFCRGSLKRIRS 209
>05_03_0414 + 13650483-13651388,13651559-13651657
Length = 334
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 551 RNLAMEKVASNVMFPCKHSNTGCTVTLVHTEK-AEHEEACEFRPYSCPCPG 402
R + E + NV K+ C + E+ A+H+ C FRP +CP G
Sbjct: 152 REIIAEVLLKNVDLKTKYH---CPEKYENEERLADHKAQCSFRPVTCPNDG 199
>02_01_0006 - 42752-43816
Length = 354
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 542 QGCEYFRGARDTSGSRTAWDGS*STPGAHSDTV 640
Q CE+ T+ SR +WDGS P +S+ +
Sbjct: 185 QSCEWIVCCDATADSRQSWDGSADAPPPNSNPI 217
>04_01_0600 + 7907142-7908047,7908218-7908316
Length = 334
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 551 RNLAMEKVASNVMFPCKHSNTGCTVTLVHTEK-AEHEEACEFRPYSCPCPG 402
R + E + NV K+ C + E+ A+H+ C FRP +CP G
Sbjct: 152 REVIAEVLLKNVDLKTKYH---CPEKYENEERLADHKAQCSFRPVTCPNDG 199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,581,708
Number of Sequences: 37544
Number of extensions: 350773
Number of successful extensions: 1044
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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