Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6b24
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like nucl... 31 0.76
AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical ... 31 0.76
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 30 1.7
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 30 1.7
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 29 3.0
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 29 3.0
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical p... 28 5.3
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical pr... 28 7.0
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 28 7.0
U23176-4|AAC46716.1| 632|Caenorhabditis elegans Fem-3 mrna bind... 28 7.0
AC006656-6|AAF39879.1| 614|Caenorhabditis elegans Fem-3 mrna bi... 28 7.0
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 27 9.3
AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical ... 27 9.3
AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical ... 27 9.3
>AF162673-1|AAF80461.1| 568|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 568
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 445 GLAPGCSAHASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQLSRTQYTCF 290
GLAPG AS ++ + AG A F + S P++ + + TCF
Sbjct: 513 GLAPGRKTVASKVMLRALCAGAIACFMNATVAGILISDPVVCNSANSNSTCF 564
>AF016413-5|AAB65255.1| 568|Caenorhabditis elegans Hypothetical
protein F27E11.1 protein.
Length = 568
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 445 GLAPGCSAHASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQLSRTQYTCF 290
GLAPG AS ++ + AG A F + S P++ + + TCF
Sbjct: 513 GLAPGRKTVASKVMLRALCAGAIACFMNATVAGILISDPVVCNSANSNSTCF 564
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Frame = +1
Query: 328 SGRTGSCSKPRYLGSWLPDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCST 507
+G T + P G W P PG R PS + P + + T T
Sbjct: 1533 AGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPT 1592
Query: 508 --TCPPVAPLAATRRIIPSYLVPIPTY 582
+ P +P A + PSY P+Y
Sbjct: 1593 SPSYSPTSPAAGQSPVSPSYSPTSPSY 1619
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Frame = +1
Query: 328 SGRTGSCSKPRYLGSWLPDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCST 507
+G T + P G W P PG R PS + P + + T T
Sbjct: 1540 AGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPT 1599
Query: 508 --TCPPVAPLAATRRIIPSYLVPIPTY 582
+ P +P A + PSY P+Y
Sbjct: 1600 SPSYSPTSPAAGQSPVSPSYSPTSPSY 1626
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 445 GLAPGCSAHASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQLSRTQYTCF 290
GLAP + S ++ + AG A F + S P+I Q S+ TCF
Sbjct: 519 GLAPSKRSTISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCF 570
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 445 GLAPGCSAHASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQLSRTQYTCF 290
GLAP + S ++ + AG A F + S P+I Q S+ TCF
Sbjct: 398 GLAPSKRSTISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCF 449
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 445 GLAPGCSAHASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQLSRTQYTCF 290
GLAP + S ++ + AG A F + S P+I Q S+ TCF
Sbjct: 499 GLAPSKRSTISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCF 550
>Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical
protein K08E3.5f protein.
Length = 493
Score = 28.3 bits (60), Expect = 5.3
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Frame = -1
Query: 671 NNTWTLLIMYTVILIHHKPGIIIYLEQRHLYVGIGTK*LGMILRVAAR---GATGGHVVE 501
NN W L I++ +K + + + +HL G+ L A + GA G +V
Sbjct: 315 NNLWAKLDAMRKIVVENKLEMEVIVNPKHLDRGLDVIQLETAAGAAIKSFSGAVGVNVPR 374
Query: 500 QHRLPVVAASE--YIPGHVLGTSAGLLGARLQHLGDVTP----GRSGSQLPKYRG-FEQL 342
LPV S+ + ++ G L Q TP G S ++ Y G F +
Sbjct: 375 SRFLPVKKTSDLLLLMSNLYDIDNGSLTLSHQRSFPTTPLVKLGSSFDKVKDYLGRFNGI 434
Query: 341 PVL--PDHLTTEQD 306
P L DHLT D
Sbjct: 435 PDLLELDHLTVSGD 448
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 28.3 bits (60), Expect = 5.3
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Frame = -1
Query: 671 NNTWTLLIMYTVILIHHKPGIIIYLEQRHLYVGIGTK*LGMILRVAAR---GATGGHVVE 501
NN W L I++ +K + + + +HL G+ L A + GA G +V
Sbjct: 318 NNLWAKLDAMRKIVVENKLEMEVIVNPKHLDRGLDVIQLETAAGAAIKSFSGAVGVNVPR 377
Query: 500 QHRLPVVAASE--YIPGHVLGTSAGLLGARLQHLGDVTP----GRSGSQLPKYRG-FEQL 342
LPV S+ + ++ G L Q TP G S ++ Y G F +
Sbjct: 378 SRFLPVKKTSDLLLLMSNLYDIDNGSLTLSHQRSFPTTPLVKLGSSFDKVKDYLGRFNGI 437
Query: 341 PVL--PDHLTTEQD 306
P L DHLT D
Sbjct: 438 PDLLELDHLTVSGD 451
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 28.3 bits (60), Expect = 5.3
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Frame = -1
Query: 671 NNTWTLLIMYTVILIHHKPGIIIYLEQRHLYVGIGTK*LGMILRVAAR---GATGGHVVE 501
NN W L I++ +K + + + +HL G+ L A + GA G +V
Sbjct: 319 NNLWAKLDAMRKIVVENKLEMEVIVNPKHLDRGLDVIQLETAAGAAIKSFSGAVGVNVPR 378
Query: 500 QHRLPVVAASE--YIPGHVLGTSAGLLGARLQHLGDVTP----GRSGSQLPKYRG-FEQL 342
LPV S+ + ++ G L Q TP G S ++ Y G F +
Sbjct: 379 SRFLPVKKTSDLLLLMSNLYDIDNGSLTLSHQRSFPTTPLVKLGSSFDKVKDYLGRFNGI 438
Query: 341 PVL--PDHLTTEQD 306
P L DHLT D
Sbjct: 439 PDLLELDHLTVSGD 452
>Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical
protein K08E3.5c protein.
Length = 511
Score = 28.3 bits (60), Expect = 5.3
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Frame = -1
Query: 671 NNTWTLLIMYTVILIHHKPGIIIYLEQRHLYVGIGTK*LGMILRVAAR---GATGGHVVE 501
NN W L I++ +K + + + +HL G+ L A + GA G +V
Sbjct: 333 NNLWAKLDAMRKIVVENKLEMEVIVNPKHLDRGLDVIQLETAAGAAIKSFSGAVGVNVPR 392
Query: 500 QHRLPVVAASE--YIPGHVLGTSAGLLGARLQHLGDVTP----GRSGSQLPKYRG-FEQL 342
LPV S+ + ++ G L Q TP G S ++ Y G F +
Sbjct: 393 SRFLPVKKTSDLLLLMSNLYDIDNGSLTLSHQRSFPTTPLVKLGSSFDKVKDYLGRFNGI 452
Query: 341 PVL--PDHLTTEQD 306
P L DHLT D
Sbjct: 453 PDLLELDHLTVSGD 466
>Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical
protein K08E3.5b protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.3
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Frame = -1
Query: 671 NNTWTLLIMYTVILIHHKPGIIIYLEQRHLYVGIGTK*LGMILRVAAR---GATGGHVVE 501
NN W L I++ +K + + + +HL G+ L A + GA G +V
Sbjct: 344 NNLWAKLDAMRKIVVENKLEMEVIVNPKHLDRGLDVIQLETAAGAAIKSFSGAVGVNVPR 403
Query: 500 QHRLPVVAASE--YIPGHVLGTSAGLLGARLQHLGDVTP----GRSGSQLPKYRG-FEQL 342
LPV S+ + ++ G L Q TP G S ++ Y G F +
Sbjct: 404 SRFLPVKKTSDLLLLMSNLYDIDNGSLTLSHQRSFPTTPLVKLGSSFDKVKDYLGRFNGI 463
Query: 341 PVL--PDHLTTEQD 306
P L DHLT D
Sbjct: 464 PDLLELDHLTVSGD 477
>Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical
protein K08E3.5a protein.
Length = 509
Score = 28.3 bits (60), Expect = 5.3
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Frame = -1
Query: 671 NNTWTLLIMYTVILIHHKPGIIIYLEQRHLYVGIGTK*LGMILRVAAR---GATGGHVVE 501
NN W L I++ +K + + + +HL G+ L A + GA G +V
Sbjct: 331 NNLWAKLDAMRKIVVENKLEMEVIVNPKHLDRGLDVIQLETAAGAAIKSFSGAVGVNVPR 390
Query: 500 QHRLPVVAASE--YIPGHVLGTSAGLLGARLQHLGDVTP----GRSGSQLPKYRG-FEQL 342
LPV S+ + ++ G L Q TP G S ++ Y G F +
Sbjct: 391 SRFLPVKKTSDLLLLMSNLYDIDNGSLTLSHQRSFPTTPLVKLGSSFDKVKDYLGRFNGI 450
Query: 341 PVL--PDHLTTEQD 306
P L DHLT D
Sbjct: 451 PDLLELDHLTVSGD 464
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -2
Query: 460 QATSSGLAPGCSAHASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQL 314
Q T SG++PG + T +TS +G + S S P P+ Q+
Sbjct: 343 QITPSGISPGSTLVQQQTTLTSVSSGTSLSAQPSNVNPSIPGIPLASQV 391
>Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical
protein T05G5.2 protein.
Length = 205
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 514 PPVAPLAA-TRRIIPSYLVPIPTYRC 588
PP AP A + I+ + LVP+P+Y+C
Sbjct: 179 PPPAPTAPQSHLIVNNQLVPMPSYQC 204
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = -2
Query: 523 PPAGM*SNSTAFLL*PHLNIFQATSSGLAPGCSAHASSTLVTSRPAGLAASFPSIAALSS 344
PP + A + P IF ++S +A S S+T V + + AS+P++ L+
Sbjct: 90 PPPRVSQEREAPPIPPRSMIFPRSTSMVAE--SRKESTTAVAPKRSVAVASYPAVPELAE 147
Query: 343 FPSFPIILQ 317
PS+ LQ
Sbjct: 148 LPSYTDALQ 156
>U23176-4|AAC46716.1| 632|Caenorhabditis elegans Fem-3 mrna binding
factor protein 2 protein.
Length = 632
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 421 HASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQLSRTQYTCFLSAASSIS 266
H + +VTSRP S+ + SFP+ + + +SR++ + F+ + + S
Sbjct: 66 HQQNHIVTSRPPTPLTDLMSLRSFQSFPN--VFMPVSRSRTSSFIQSDTDSS 115
>AC006656-6|AAF39879.1| 614|Caenorhabditis elegans Fem-3 mrna
binding factor protein 1 protein.
Length = 614
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 421 HASSTLVTSRPAGLAASFPSIAALSSFPSFPIILQLSRTQYTCFLSAASSIS 266
H + +VTSRP S+ + SFP+ + + +SR++ + F+ + + S
Sbjct: 66 HQQNHIVTSRPPTPLTDLMSLRSFQSFPN--VFMPVSRSRTSSFIQSDTDSS 115
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 490 RRCCSTTCPPVAPLAATRRIIPSYLVP 570
RR C TT VAP+A R+ PS P
Sbjct: 652 RRMCGTTAGSVAPVAQVRQTNPSRQPP 678
>AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical
protein T22D1.3b protein.
Length = 462
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 449 LGTSA----GLLGARLQHLGDVTPGRSGSQLPKYRGFEQLPVLPDHLTTE 312
LG SA GLL A + G+ G G ++ KYRG L + H +++
Sbjct: 397 LGASAVMMGGLLAATTEAPGEYFWGPGGVRVKKYRGMGSLDAMEAHASSQ 446
>AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical
protein T22D1.3a protein.
Length = 534
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 449 LGTSA----GLLGARLQHLGDVTPGRSGSQLPKYRGFEQLPVLPDHLTTE 312
LG SA GLL A + G+ G G ++ KYRG L + H +++
Sbjct: 397 LGASAVMMGGLLAATTEAPGEYFWGPGGVRVKKYRGMGSLDAMEAHASSQ 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,710,453
Number of Sequences: 27780
Number of extensions: 258525
Number of successful extensions: 904
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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