Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6b23
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   2.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   3.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   3.9  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   5.1  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   5.1  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   5.1  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   5.1  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   5.1  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   5.1  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   5.1  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   5.1  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   5.1  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   5.1  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   5.1  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   6.8  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFSSILSPLKCEMQKLKFLN 294
           I+  NN LS+ ++   N NN+++  +    ++Q    +N
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIIN 119


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 290 RNFNFCISHFSGLRIEEKLFQFLVTSNSCDNKLFVNKI 177
           RNF+ C SH +   I      F+    S    L +NK+
Sbjct: 114 RNFSTCSSHPTAAFISYGTLFFIYVQPSATFSLDLNKV 151


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 140 CMALNCLNPYFY 105
           C A+ CL+PY Y
Sbjct: 317 CKAVACLDPYVY 328


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 290 RNFNFCISHFSGLRIEEKLFQFLVTSNSCDNKLFVNKI 177
           RNF+ C SH +   I      F+    S    L +NK+
Sbjct: 115 RNFSTCSSHPTAAFISYGTLFFIYVHPSATFSLDLNKV 152


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYN 102


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYN 335


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYN 335


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 178 ILLTNNLLSHEFDVTRN*NNFS 243
           I+  NN LS+ ++   N NN++
Sbjct: 81  IISNNNPLSNNYNYNNNYNNYN 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,812
Number of Sequences: 438
Number of extensions: 3095
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)