Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6b17
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   2.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.9  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   9.0  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.0  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 332 GAGEDRAADGQPHGEHCCTDHAH 400
           G    +    Q HG+HCC   +H
Sbjct: 272 GRNSPKEQQQQQHGQHCCCRGSH 294


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +3

Query: 234  YDNLTAQIKNIVGDQGLNLLINNAGITTKFTKLGLVKTEQLMDNLTVNTVAPIMLTKSLL 413
            Y N+T+QI   +      +L+N+A I T   K+     +  M+ +    +    +T +L 
Sbjct: 1048 YRNITSQIPFAIDPSKFGILVNDAYIVTASHKVLFDGIDWNMERIPQEELTLESITVNLG 1107

Query: 414  P--LLKRAAELYSGEAVGVERAAVIN 485
            P   L +     + + +G   A V N
Sbjct: 1108 PSYRLVKTHRNATFDLIGPNNAVVFN 1133


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +3

Query: 234  YDNLTAQIKNIVGDQGLNLLINNAGITTKFTKLGLVKTEQLMDNLTVNTVAPIMLTKSLL 413
            Y N+T+QI   +      +L+N+A I T   K+     +  M+ +    +    +T +L 
Sbjct: 1049 YRNITSQIPFAIDPSKFGILVNDAYIVTASHKVLFDGIDWNMERIPQEELTLESITVNLG 1108

Query: 414  P--LLKRAAELYSGEAVGVERAAVIN 485
            P   L +     + + +G   A V N
Sbjct: 1109 PSYRLVKTHRNATFDLIGPNNAVVFN 1134


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 509 YGTKHRAHVDDGGSLYSHCLATVKLGC 429
           +GTK +  V  GG+   H L  ++ GC
Sbjct: 274 HGTKLKVCVSYGGTAVQHQLQLMRGGC 300


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 578  INEHRLEEGEHPRCLYASRL 637
            + EHRL E    R LYA+RL
Sbjct: 1406 VYEHRLREEALQRELYATRL 1425


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 578  INEHRLEEGEHPRCLYASRL 637
            + EHRL E    R LYA+RL
Sbjct: 1403 VYEHRLREEALQRELYATRL 1422


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 425  LQ*WQQTLSEHDRCNSVHREVVHQLLGLHQPQFSK 321
            LQ  QQ   +  + +  H++  HQL   HQPQ S+
Sbjct: 1308 LQQQQQQQQQQQQQHQQHQQ--HQLQHHHQPQLSQ 1340


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,806
Number of Sequences: 2352
Number of extensions: 13704
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)