SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6b14
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   0.95 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.2  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   3.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 577 LSASVPCGVNSTSNSPL 527
           LS + PC +NSTS+ P+
Sbjct: 177 LSWNNPCSINSTSSQPV 193


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 3   LLMLTYFLNIIL-KQVRSFTRVLAK 74
           L+ LTYF NI+  K++ +  ++L+K
Sbjct: 81  LVFLTYFFNILFRKKLLNAVKILSK 105


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 3   LLMLTYFLNIIL-KQVRSFTRVLAK 74
           L+ LTYF NI+  K++ +  ++L+K
Sbjct: 77  LVFLTYFFNILFRKKLLNAVKILSK 101


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 77  APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 110


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 595 APPARILSASVPCGVNSTSNSPLKNCLSNSAFSP 494
           APP      S P   N+T +S L + LS S   P
Sbjct: 121 APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = -2

Query: 652 PPS*IKVPNPVGVKKAGIPA--PPARILSASVPCGVNSTSNSPL 527
           PP+      P+       PA  PP    S+  P  V S +++PL
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPL 55


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 614 KKGRNTCTSCTYSFCQC 564
           +KG+ TC + + ++C C
Sbjct: 34  QKGQKTCLNLSINYCIC 50


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +3

Query: 300 DVSDGS-KLLVGGFGLCGIPENLIKALNIKKVSALTVVSNNAGVED 434
           D S+G+ K  +           +   +NI+K    TVV    GVE+
Sbjct: 122 DASNGNLKFSIDNILKADFGRRITDPINIRKCKPKTVVPEVGGVEE 167


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 237 ATYATIIRKSKIYASAQEVVQ 299
           AT+ T+++  KI+A    V++
Sbjct: 82  ATFVTVLQLHKIFAKGLNVIE 102


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 237 ATYATIIRKSKIYASAQEVVQ 299
           AT+ T+++  KI+A    V++
Sbjct: 82  ATFVTVLQLHKIFAKGLNVIE 102


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 237 ATYATIIRKSKIYASAQEVVQ 299
           AT+ T+++  KI+A    V++
Sbjct: 82  ATFVTVLQLHKIFAKGLNVIE 102


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 562 PCGVNSTSNSPLKNCLSN 509
           P GV ST+ SP    LSN
Sbjct: 124 PSGVISTNTSPPSPILSN 141


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 612 KRQEYLHLLHVFFLPVYPAVSILPLILHL 526
           K+  + H L VFF      V I  LI ++
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 612 KRQEYLHLLHVFFLPVYPAVSILPLILHL 526
           K+  + H L VFF      V I  LI ++
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 14/61 (22%), Positives = 26/61 (42%)
 Frame = +3

Query: 366 IKALNIKKVSALTVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEV 545
           +K L +  +  +  V   A V   G  + + S+  K +  +Y  +  +   QF+    EV
Sbjct: 57  VKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNVTRAYCNKKIDRNLQFVVSLPEV 116

Query: 546 E 548
           E
Sbjct: 117 E 117


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 14/61 (22%), Positives = 26/61 (42%)
 Frame = +3

Query: 366 IKALNIKKVSALTVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEV 545
           +K L +  +  +  V   A V   G  + + S+  K +  +Y  +  +   QF+    EV
Sbjct: 57  VKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNVTRAYCNKKIDRNLQFVVSLPEV 116

Query: 546 E 548
           E
Sbjct: 117 E 117


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 612 KRQEYLHLLHVFFLPVYPAVSILPLILHL 526
           K+  + H L VFF      V I  LI ++
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 612 KRQEYLHLLHVFFLPVYPAVSILPLILHL 526
           K+  + H L VFF      V I  LI ++
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 614 KKGRNTCTSCTYSFC 570
           K+ RN C  C Y  C
Sbjct: 132 KRQRNRCQYCRYQKC 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,383
Number of Sequences: 336
Number of extensions: 3053
Number of successful extensions: 28
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -