Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6b11
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05424-2|AAB13625.1| 691|Homo sapiens cell surface glycoprotein... 31 4.4
L05424-1|AAB13628.1| 742|Homo sapiens cell surface glycoprotein... 31 4.4
L05423-1|AAB13623.1| 675|Homo sapiens cell surface glycoprotein... 31 4.4
AL133330-4|CAC10347.1| 719|Homo sapiens CD44 molecule (Indian b... 31 4.4
AJ251595-1|CAB61878.1| 742|Homo sapiens transmembrane glycoprot... 31 4.4
M60450-1|AAA61275.1| 653|Homo sapiens voltage-gated potassium c... 30 7.6
M55514-1|AAA60034.1| 653|Homo sapiens potassium channel protein... 30 7.6
L02751-1|AAA36140.1| 653|Homo sapiens potassium channel protein. 30 7.6
BC012826-1|AAH12826.1| 364|Homo sapiens zinc finger, DHHC-type ... 30 7.6
BC006200-1|AAH06200.1| 364|Homo sapiens zinc finger, DHHC-type ... 30 7.6
BC003128-1|AAH03128.1| 364|Homo sapiens zinc finger, DHHC-type ... 30 7.6
BC000035-1|AAH00035.1| 364|Homo sapiens zinc finger, DHHC-type ... 30 7.6
AY358558-1|AAQ88922.1| 364|Homo sapiens ZDHHC9 protein. 30 7.6
AL359542-1|CAI42069.1| 364|Homo sapiens zinc finger, DHHC-type ... 30 7.6
AL161962-1|CAB82308.1| 381|Homo sapiens hypothetical protein pr... 30 7.6
AL034405-1|CAI42905.1| 364|Homo sapiens zinc finger, DHHC-type ... 30 7.6
AK001524-1|BAA91740.1| 364|Homo sapiens protein ( Homo sapiens ... 30 7.6
AK001424-1|BAA91683.1| 285|Homo sapiens protein ( Homo sapiens ... 30 7.6
AF151847-1|AAD34084.1| 382|Homo sapiens CGI-89 protein protein. 30 7.6
AB209807-1|BAD93044.1| 389|Homo sapiens zinc finger, DHHC domai... 30 7.6
>L05424-2|AAB13625.1| 691|Homo sapiens cell surface glycoprotein
CD44 protein.
Length = 691
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 668 EQSEIGSGHVYYLFPSV*PIER*ADGSTGVRWLPDSTDEITCCTFFSIS 522
E+S G+++Y F +V PI W+ DSTD I T S S
Sbjct: 185 ERSSTSGGYIFYTFSTVHPIP-----DEDSPWITDSTDRIPATTLMSTS 228
>L05424-1|AAB13628.1| 742|Homo sapiens cell surface glycoprotein
CD44 protein.
Length = 742
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 668 EQSEIGSGHVYYLFPSV*PIER*ADGSTGVRWLPDSTDEITCCTFFSIS 522
E+S G+++Y F +V PI W+ DSTD I T S S
Sbjct: 185 ERSSTSGGYIFYTFSTVHPIP-----DEDSPWITDSTDRIPATTLMSTS 228
>L05423-1|AAB13623.1| 675|Homo sapiens cell surface glycoprotein
CD44 protein.
Length = 675
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 668 EQSEIGSGHVYYLFPSV*PIER*ADGSTGVRWLPDSTDEITCCTFFSIS 522
E+S G+++Y F +V PI W+ DSTD I T S S
Sbjct: 185 ERSSTSGGYIFYTFSTVHPIP-----DEDSPWITDSTDRIPATTLMSTS 228
>AL133330-4|CAC10347.1| 719|Homo sapiens CD44 molecule (Indian
blood group) protein.
Length = 719
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 668 EQSEIGSGHVYYLFPSV*PIER*ADGSTGVRWLPDSTDEITCCTFFSIS 522
E+S G+++Y F +V PI W+ DSTD I T S S
Sbjct: 162 ERSSTSGGYIFYTFSTVHPIP-----DEDSPWITDSTDRIPATTLMSTS 205
>AJ251595-1|CAB61878.1| 742|Homo sapiens transmembrane glycoprotein
protein.
Length = 742
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 668 EQSEIGSGHVYYLFPSV*PIER*ADGSTGVRWLPDSTDEITCCTFFSIS 522
E+S G+++Y F +V PI W+ DSTD I T S S
Sbjct: 185 ERSSTSGGYIFYTFSTVHPIP-----DEDSPWITDSTDRIPATTLMSTS 228
>M60450-1|AAA61275.1| 653|Homo sapiens voltage-gated potassium
channel protein.
Length = 653
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 356 DNRWLVLSASRGAYSLAVHGQQAPHLQNAQHILTVRNAP 240
D+R LV++ S G + ++ APHL+N+ H T+ N P
Sbjct: 334 DDRDLVMALSAGGHGGLLNDTSAPHLENSGH--TIFNDP 370
>M55514-1|AAA60034.1| 653|Homo sapiens potassium channel protein
protein.
Length = 653
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 356 DNRWLVLSASRGAYSLAVHGQQAPHLQNAQHILTVRNAP 240
D+R LV++ S G + ++ APHL+N+ H T+ N P
Sbjct: 334 DDRDLVMALSAGGHGGLLNDTSAPHLENSGH--TIFNDP 370
>L02751-1|AAA36140.1| 653|Homo sapiens potassium channel protein.
Length = 653
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 356 DNRWLVLSASRGAYSLAVHGQQAPHLQNAQHILTVRNAP 240
D+R LV++ S G + ++ APHL+N+ H T+ N P
Sbjct: 334 DDRDLVMALSAGGHGGLLNDTSAPHLENSGH--TIFNDP 370
>BC012826-1|AAH12826.1| 364|Homo sapiens zinc finger, DHHC-type
containing 9 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>BC006200-1|AAH06200.1| 364|Homo sapiens zinc finger, DHHC-type
containing 9 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>BC003128-1|AAH03128.1| 364|Homo sapiens zinc finger, DHHC-type
containing 9 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>BC000035-1|AAH00035.1| 364|Homo sapiens zinc finger, DHHC-type
containing 9 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>AY358558-1|AAQ88922.1| 364|Homo sapiens ZDHHC9 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>AL359542-1|CAI42069.1| 364|Homo sapiens zinc finger, DHHC-type
containing 9 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>AL161962-1|CAB82308.1| 381|Homo sapiens hypothetical protein
protein.
Length = 381
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 186 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 217
>AL034405-1|CAI42905.1| 364|Homo sapiens zinc finger, DHHC-type
containing 9 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>AK001524-1|BAA91740.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ10662 fis, clone NT2RP2006141. ).
Length = 364
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 169 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 200
>AK001424-1|BAA91683.1| 285|Homo sapiens protein ( Homo sapiens
cDNA FLJ10562 fis, clone NT2RP2002701. ).
Length = 285
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 90 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 121
>AF151847-1|AAD34084.1| 382|Homo sapiens CGI-89 protein protein.
Length = 382
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 187 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 218
>AB209807-1|BAD93044.1| 389|Homo sapiens zinc finger, DHHC domain
containing 9 variant protein.
Length = 389
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 143 CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
C W G C Y +F+ F+ +LSLL + FA
Sbjct: 194 CPWVGNCVGKRNYRYFYLFILSLSLLTIYVFA 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,614,232
Number of Sequences: 237096
Number of extensions: 2303475
Number of successful extensions: 10208
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10208
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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