Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6b11
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical ...    36   0.023
U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical pr...    32   0.37 
U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical pr...    32   0.37 
AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical ...    31   0.65 
Z69904-2|CAD57718.1|  298|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z82282-10|CAB05277.2|  600|Caenorhabditis elegans Hypothetical p...    29   2.6  
U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc seven...    29   4.6  
U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc seven...    29   4.6  
AL021493-3|CAA16390.2|  243|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z83109-3|CAB05515.2|  300|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical
           protein Y47H9C.2 protein.
          Length = 368

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 170 DLSTLVFDS-CKWDGICTDLAYYSHFFQFLEALSLLYV*FFA 48
           D   L+FD  C W G C  L  Y++F++F+  LS+L +  FA
Sbjct: 184 DNCVLMFDHHCPWVGNCIGLRNYTYFYRFVFCLSILVIYLFA 225


>U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical
           protein F40B5.2b protein.
          Length = 441

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 505 IVLSSIEILKKVQQVISSVESGNHLTPVEPSAHLSIGYTEGK 630
           IVLS  E+ KKV  ++S    G  + P  P  HL+  +  G+
Sbjct: 362 IVLSDSELSKKVNLILSGHTHGGQMYPFVPIVHLANAFVRGQ 403


>U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical
           protein F40B5.2a protein.
          Length = 468

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 505 IVLSSIEILKKVQQVISSVESGNHLTPVEPSAHLSIGYTEGK 630
           IVLS  E+ KKV  ++S    G  + P  P  HL+  +  G+
Sbjct: 389 IVLSDSELSKKVNLILSGHTHGGQMYPFVPIVHLANAFVRGQ 430


>AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical
           protein C16C4.7 protein.
          Length = 361

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 467 CKNIPVDS*NNSSFF*LYMIRICKLSVLTRMSKLRMSDNR-WLVLS 333
           C   PV     + FF  ++I IC++S  +R S++R S +R WL +S
Sbjct: 148 CSRFPVSFQFQNKFFLRHLISICRISTFSR-SRIRFSYSRIWLHIS 192


>Z69904-2|CAD57718.1|  298|Caenorhabditis elegans Hypothetical
           protein ZK20.2 protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +2

Query: 392 IACKCVSCIIKKMNYYFTSQQVY--FYKAALLIKAI 493
           I CKC   I + +N+Y T++++    Y +A LIKA+
Sbjct: 44  IQCKCFESIQQMVNHYLTTKELISSIYSSAHLIKAV 79


>Z82282-10|CAB05277.2|  600|Caenorhabditis elegans Hypothetical
           protein T07G12.6 protein.
          Length = 600

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 511 LSSIEILKKVQQVISSVESGNHLTPVEPSAHLSIGYTEGKR*YT*PLPISDCS 669
           LSS++   KV+  +S +     LTPVE S+   I +++       P+P+  CS
Sbjct: 252 LSSLKETVKVEPAVSKLTKRRRLTPVECSSETMIPHSQ-------PIPLDTCS 297


>U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 3 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 383 TRMSKLRMSDNRWLVLSASRGAYSLAVHGQQAPHLQNAQHILTVRNAPAISVNNQPSACF 204
           TR+  +      W+ L    G+  L +HG  +PHLQ    +   R  P       PS   
Sbjct: 145 TRLWSIFQDTFNWMPLCGLIGSRILCMHGGLSPHLQTLDQL---RQLPRPQDPPNPS--- 198

Query: 203 QVTIRLKFAEPD 168
            + I L +A+PD
Sbjct: 199 -IGIDLLWADPD 209


>U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 4 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 383 TRMSKLRMSDNRWLVLSASRGAYSLAVHGQQAPHLQNAQHILTVRNAPAISVNNQPSACF 204
           TR+  +      W+ L    G+  L +HG  +PHLQ    +   R  P       PS   
Sbjct: 145 TRLWSIFQDTFNWMPLCGLIGSRILCMHGGLSPHLQTLDQL---RQLPRPQDPPNPS--- 198

Query: 203 QVTIRLKFAEPD 168
            + I L +A+PD
Sbjct: 199 -IGIDLLWADPD 209


>AL021493-3|CAA16390.2|  243|Caenorhabditis elegans Hypothetical
           protein Y51A2B.3 protein.
          Length = 243

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 50  RKIKHTTMIELPKIERNVNNTQ-DLCKCRPICKSRRREWKGQVQQTSAELLLE 205
           R IK+  +I  P +E N+  T+     C+ +C    R  +GQ+Q      L E
Sbjct: 125 RLIKYFDIIVKPYLELNLTETEVTYILCQIVCNYAGRRLQGQIQAAGERFLEE 177


>Z83109-3|CAB05515.2|  300|Caenorhabditis elegans Hypothetical
           protein F44G3.5 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 106 IHISFNFWKLYHCCMFNFSPNTILDYIN 23
           I  +F+F+  Y C  FNF    +LD IN
Sbjct: 249 IQSAFSFFNFYGCSFFNFVVYFLLDPIN 276


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
           protein F55F10.1 protein.
          Length = 4368

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 146 SRRREWKGQVQQTSAELLLESKPKVDCLRKWPAHYA-QSKCVVRSADAGPVVHAPQASMH 322
           S+  + KGQ  +  AELL+ S+   D L K  A +A Q   V+ +A+ G  +   + ++ 
Sbjct: 482 SKALQRKGQKDERWAELLVRSRQIRDGLEKGAAPFALQKGAVLEAAEKGHWLLVDEINLA 541

Query: 323 P 325
           P
Sbjct: 542 P 542


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,480,310
Number of Sequences: 27780
Number of extensions: 384300
Number of successful extensions: 1135
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)