Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6b07
         (463 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 150 GYNFPNVTDNFSELSNVFLIIMLIL 76
           G+N  N+TD +  L   FL I+ IL
Sbjct: 258 GFNSDNLTDVYFTLQWAFLQILEIL 282


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 52  FYIIKICLQN*HDNQKHIAQFTKVVSHVWEIISK 153
           FYI  +C    H+  K      K+ ++  EII K
Sbjct: 647 FYICHVCCSTIHEVSKAGELIHKIETNDHEIIDK 680



 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 231 SMRVSNVVCWLHTCRS 184
           ++  +NVVC  H C S
Sbjct: 916 TLYTANVVCICHVCYS 931


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 202 PTHNIADTHALVTAVGTGKGLRPGMAN 282
           PT +I    +  TAVG   GLR  +AN
Sbjct: 51  PTPDIIWVRSDGTAVGDVPGLRQVLAN 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,185
Number of Sequences: 336
Number of extensions: 1812
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)