Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6b03
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   7.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.7  

>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/65 (18%), Positives = 35/65 (53%)
 Frame = +3

Query: 438 SQASIEYKDTIVIESIYDNMNNLVEIVINKVSNVPRILMQLIGLMVPYFRKLNRINIRNC 617
           ++A+ +  + + ++ I D+   + + V++K    PR +++++  +    RKL  + +R+ 
Sbjct: 26  AEAAKKDAELLAVQEIRDHARQIDKAVVSKE---PRFILRVLRSLPTTRRKLALVVVRSL 82

Query: 618 KTNVY 632
              +Y
Sbjct: 83  AVQLY 87


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 541  GTLLTLLMTISTRLFMLSYIDSMTIV 464
            GT  T +    TR   + Y+D+MTIV
Sbjct: 998  GTATTRIPDSITRSCSVGYLDNMTIV 1023


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,511
Number of Sequences: 2352
Number of extensions: 11698
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)