Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6b01
(740 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,... 168 1e-40
UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p; ... 160 3e-38
UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious... 146 4e-34
UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:... 126 8e-28
UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-P... 121 2e-26
UniRef50_Q56UE8 Cluster: Putative double strand RNA binding prot... 77 5e-13
UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aed... 75 2e-12
UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736 p... 67 5e-10
UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3; C... 60 4e-08
UniRef50_O75569 Cluster: Interferon-inducible double stranded RN... 60 4e-08
UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19; Eutele... 57 5e-07
UniRef50_UPI0000DB7121 Cluster: PREDICTED: similar to loquacious... 56 7e-07
UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia c... 40 0.049
UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus Desul... 40 0.085
UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n... 39 0.15
UniRef50_Q1VN63 Cluster: DsRNA-specific ribonuclease; n=1; Psych... 39 0.15
UniRef50_Q5FPZ7 Cluster: Ribonuclease III; n=1; Gluconobacter ox... 38 0.26
UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep: Rib... 37 0.45
UniRef50_Q0BTG2 Cluster: Ribonuclease III; n=4; Rhodospirillales... 36 0.79
UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis ala... 36 1.0
UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.0
UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus h... 36 1.0
UniRef50_A4YY80 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_O12982 Cluster: DsRNA adenosine deaminase; n=3; Xenopus... 35 1.8
UniRef50_Q99MU3 Cluster: Double-stranded RNA-specific adenosine ... 35 1.8
UniRef50_P55265 Cluster: Double-stranded RNA-specific adenosine ... 35 1.8
UniRef50_Q47A01 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q3IL48 Cluster: Putative alpha-amylase; n=1; Pseudoalte... 35 2.4
UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep: Ri... 35 2.4
UniRef50_Q084T2 Cluster: Polysaccharide biosynthesis protein; n=... 35 2.4
UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema denticol... 35 2.4
UniRef50_Q2IJ20 Cluster: Putative uncharacterized protein precur... 34 3.2
UniRef50_A6SI61 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_Q4RH09 Cluster: Chromosome undetermined SCAF15077, whol... 34 4.2
UniRef50_Q29M28 Cluster: GA17171-PA; n=1; Drosophila pseudoobscu... 34 4.2
UniRef50_UPI0000E4A102 Cluster: PREDICTED: hypothetical protein,... 33 5.6
UniRef50_Q16MI6 Cluster: Putative uncharacterized protein; n=3; ... 33 5.6
UniRef50_A7F428 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A7QF73 Cluster: Chromosome undetermined scaffold_87, wh... 33 7.4
UniRef50_A7SVV0 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 33 7.4
UniRef50_A7RYG5 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.4
UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. ... 33 7.4
UniRef50_UPI0000E82402 Cluster: PREDICTED: hypothetical protein,... 33 9.7
UniRef50_UPI0000E25062 Cluster: PREDICTED: similar to KIAA0290; ... 33 9.7
UniRef50_UPI0000D9DDEE Cluster: PREDICTED: hypothetical protein;... 33 9.7
UniRef50_UPI0000D57240 Cluster: PREDICTED: similar to CG12598-PA... 33 9.7
UniRef50_Q9I8Y2 Cluster: Double-stranded RNA-specific editase; n... 33 9.7
UniRef50_Q7DAG9 Cluster: Peptide synthetase, putative; n=10; Myc... 33 9.7
UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:... 33 9.7
UniRef50_A5EBN0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A0KEX1 Cluster: LysM domain protein; n=2; Aeromonas|Rep... 33 9.7
UniRef50_Q1WDR2 Cluster: Nova; n=3; Echinoida|Rep: Nova - Parace... 33 9.7
>UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG6866-PB, isoform B - Tribolium castaneum
Length = 384
Score = 168 bits (409), Expect = 1e-40
Identities = 90/166 (54%), Positives = 103/166 (62%), Gaps = 6/166 (3%)
Frame = +3
Query: 261 HIPHGPRRRYQTRPKPNNLQRLPLDEAAKREMESLPTKTPVSVLQELLARRGTVPKYELV 440
H H R+ + +RL L E AK EM SLPTKTPVSVLQELL+RRG PKYELV
Sbjct: 27 HNVHPRRKNNRNTLHGMQAERLSLSEEAKLEMASLPTKTPVSVLQELLSRRGATPKYELV 86
Query: 441 QIEGMIHEPTFRYRVTV-ADLVAMGTGRXXXXXXXXXXXXLLDKLTGATPADQT-----T 602
QIEG IHEP FRYRV + DLVA GTGR LLD L G +Q T
Sbjct: 87 QIEGAIHEPIFRYRVFINNDLVATGTGRSKKDAKHAAAKNLLDVLVGKQSPEQANASNGT 146
Query: 603 NGNVPETGAVVPTFEDKLMGNPVGWLQELCMSRFWPPPSYHAENDD 740
G T VV F+DK+MGNP+GWLQE+CMSR WPPPSY E+++
Sbjct: 147 PGANDITAQVVSPFDDKVMGNPIGWLQEMCMSRRWPPPSYEMEHEE 192
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 378 PVSVLQEL-LARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGR 521
P+ LQE+ ++RR P YE+ EG+ HE F V +GTG+
Sbjct: 168 PIGWLQEMCMSRRWPPPSYEMEHEEGLPHERQFTIACQVLKFKEVGTGK 216
>UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE14437p - Nasonia vitripennis
Length = 394
Score = 160 bits (389), Expect = 3e-38
Identities = 92/187 (49%), Positives = 116/187 (62%), Gaps = 13/187 (6%)
Frame = +3
Query: 219 IHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNL--QRLPLDEAAKREMESLPTKTPVSVL 392
+ M V G P H + RR +TR + L + LPLDEAA+ EM++LP KTPVSVL
Sbjct: 24 VGNMMVGGVVPVPNHA-NNVHRRSKTRVTMHALMSEALPLDEAARLEMKALPNKTPVSVL 82
Query: 393 QELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLV-----AMGTGRXXXXXXXXXXXX 557
QELL+RRGT PKYELVQIEG IHEPTFRYRVTVAD+V AMGTGR
Sbjct: 83 QELLSRRGTTPKYELVQIEGAIHEPTFRYRVTVADVVDPIVSAMGTGRSKKEAKHAAAKA 142
Query: 558 LLDKLTGATP--ADQTTNGNVPETGAVVPT----FEDKLMGNPVGWLQELCMSRFWPPPS 719
+LDKL G A+ ++P++ + E+K++ NP+G LQE+CMSR WPPP
Sbjct: 143 VLDKLIGVNTENAEAPIPNSIPDSQNIQEIQSGYGEEKVVNNPIGSLQEMCMSRHWPPPK 202
Query: 720 YHAENDD 740
Y E ++
Sbjct: 203 YSMEGEE 209
>UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious
CG6866-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to loquacious CG6866-PA, isoform A -
Apis mellifera
Length = 338
Score = 146 bits (355), Expect = 4e-34
Identities = 87/206 (42%), Positives = 119/206 (57%), Gaps = 12/206 (5%)
Frame = +3
Query: 159 MEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQ--RLPL 332
+E +H V P + P V G+ H + N RR + R ++L + P+
Sbjct: 6 VEMEEIHQPQQVGPNMMPNV-GGVPNHSNNVN---------RRNRVRSSLHSLMIGKRPI 55
Query: 333 DEAAKREMESLPTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLV--- 503
EAA+ EM+SL KTPVS+LQELL+RRGT PKYEL+Q+EG IHEP FRYRVTVAD+V
Sbjct: 56 SEAAQLEMKSLSNKTPVSILQELLSRRGTTPKYELIQVEGAIHEPIFRYRVTVADVVDPI 115
Query: 504 --AMGTGRXXXXXXXXXXXXLLDKL--TGATPADQTTNGNVPETGAVVPTF---EDKLMG 662
AMGTG+ +LDKL + D ++P++ + E+K++
Sbjct: 116 VSAMGTGKSKKEAKHAAARAVLDKLCRLNSESPDSPLPNSIPDSENLQELSGYGEEKIIT 175
Query: 663 NPVGWLQELCMSRFWPPPSYHAENDD 740
NP+G LQE+CMSR WPPP Y EN++
Sbjct: 176 NPIGALQEMCMSRHWPPPKYTIENEE 201
>UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:
CG6866-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 465
Score = 126 bits (303), Expect = 8e-28
Identities = 75/161 (46%), Positives = 88/161 (54%), Gaps = 23/161 (14%)
Frame = +3
Query: 324 LPLDEAAKREMES----LPTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 491
LP DEA K E+ L KTPVS+LQELL+RRG P YELVQIEG IHEPTFR+RV+
Sbjct: 114 LPSDEALKFVSETDANGLAMKTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSF 173
Query: 492 AD----LVAMGTGRXXXXXXXXXXXXLLDKLTGA-TPADQTTNGNVPETGAVVP------ 638
D AMG GR L+DKL GA P +++ TG V
Sbjct: 174 KDKDTPFTAMGAGRSKKEAKHAAARALIDKLIGAQLPESPSSSAGPSVTGLTVAGSGGDG 233
Query: 639 --------TFEDKLMGNPVGWLQELCMSRFWPPPSYHAEND 737
DK +GNP+GWLQE+CM R WPPPSY E +
Sbjct: 234 NANATGGGDASDKTVGNPIGWLQEMCMQRRWPPPSYETETE 274
>UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 395
Score = 121 bits (292), Expect = 2e-26
Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 16/148 (10%)
Frame = +3
Query: 342 AKREMESLPTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVAD----LVAM 509
++ + L KTPVS+LQE+L+RRG P YELVQIEG IHEPTFR+RV+ + AM
Sbjct: 104 SETDANGLAMKTPVSILQEILSRRGITPGYELVQIEGAIHEPTFRFRVSFKEKDTPFTAM 163
Query: 510 GTGRXXXXXXXXXXXXLLDKLTGA------------TPADQTTNGNVPETGAVVPTFEDK 653
G GR L+DKL GA + AD T G+ + V +DK
Sbjct: 164 GAGRSKKEAKHAAARALIDKLMGAQLPEAASSATATSAADPTAAGSGGDCNTAVGDPDDK 223
Query: 654 LMGNPVGWLQELCMSRFWPPPSYHAEND 737
++GNP+G LQELCM R WPPP+Y E +
Sbjct: 224 IVGNPIGLLQELCMQRRWPPPTYATETE 251
>UniRef50_Q56UE8 Cluster: Putative double strand RNA binding
protein; n=1; Lymnaea stagnalis|Rep: Putative double
strand RNA binding protein - Lymnaea stagnalis (Great
pond snail)
Length = 141
Score = 77.0 bits (181), Expect = 5e-13
Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +3
Query: 366 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVAD-LVAMGTGRXXXXXXX 542
P KTP+S LQE + P+Y+L+ EG +HEPTF RVTV D VA G G
Sbjct: 5 PGKTPISYLQEYATKHAITPQYDLIANEGAVHEPTFIMRVTVGDNAVATGKGSSKKKAKH 64
Query: 543 XXXXXLLDKLTGATPADQTTNGNVPETGAVVPTFEDKLMGNPVGWLQELCMSRFWPPPSY 722
L+ L G T + + A P E+ +GNP+G LQE + PP Y
Sbjct: 65 AAAQNALNILLGVTNGQEEIKEEPTVSTAPTPNKEED-VGNPIGELQEFTQKKLLKPPIY 123
>UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aedes
aegypti|Rep: RNA binding protein, putative - Aedes
aegypti (Yellowfever mosquito)
Length = 289
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +3
Query: 243 SGPNGEHIPHGPRRRYQTRPKPNNL-QRLPLDEAAKREMESLPTKTPVSVLQELLARRGT 419
S P+G+ I G ++ L ++ ++++A + + KTP++VLQE+L RRG
Sbjct: 98 SYPDGDAIGTGQSKKEAKHAAAKALIDKMGINDSANKPVGK---KTPITVLQEVLTRRGI 154
Query: 420 VPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXXXXLLDKLTGATPADQT 599
P+Y+ +Q + +H+ TFRYRV+ D AMGTG+ L+DKL G D
Sbjct: 155 YPQYDFIQPDAAVHDGTFRYRVSYQDKEAMGTGKSKKEAKQAAAKSLIDKLAGVAFWDTH 214
Query: 600 TNG 608
+ G
Sbjct: 215 SQG 217
Score = 72.5 bits (170), Expect = 1e-11
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Frame = +3
Query: 297 RPKPNNLQRLPLDEAAKREM--ESLPTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPT 470
RP P N LP++EA K + +S K PVS+L ELL+RRG P+Y+L+ EG HE T
Sbjct: 34 RPVPTN-DALPIEEAFKIALTGKSNTKKMPVSLLYELLSRRGITPQYDLLPREGAAHEQT 92
Query: 471 FRYRVTVADLVAMGTGRXXXXXXXXXXXXLLDKLTGATPADQTTNGNVPET 623
F YRV+ D A+GTG+ L+DK+ A++ P T
Sbjct: 93 FSYRVSYPDGDAIGTGQSKKEAKHAAAKALIDKMGINDSANKPVGKKTPIT 143
>UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC53736 protein -
Strongylocentrotus purpuratus
Length = 306
Score = 66.9 bits (156), Expect = 5e-10
Identities = 43/119 (36%), Positives = 54/119 (45%)
Frame = +3
Query: 372 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXXX 551
KTPVS+LQEL A++G P Y+ + EG H+P F R T D+V G G
Sbjct: 5 KTPVSILQELCAKKGVTPVYDTIGQEGASHQPKFTIRCTAGDVVGNGQGPSKKVAKQSAA 64
Query: 552 XXLLDKLTGATPADQTTNGNVPETGAVVPTFEDKLMGNPVGWLQELCMSRFWPPPSYHA 728
+L +L PA +T + G L NPVG LQEL W P Y A
Sbjct: 65 EDVLQQLDIEVPAVETEQ----DEGR-------SLKDNPVGELQELVTCMGWRKPEYEA 112
>UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3;
Clupeocephala|Rep: TAR (HIV) RNA binding protein 2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 346
Score = 60.5 bits (140), Expect = 4e-08
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Frame = +3
Query: 366 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXX 545
P KTP+S+LQE R G P Y+L++ EG H+P F +RV+V D+ G G
Sbjct: 27 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVSVGDINCTGHGPSKKAAKHK 86
Query: 546 XXXXLLDKLTGATPADQTTN-------------GNVPETGAVVPTFEDKLMGNPVGWLQE 686
L L G N G P++ + + NPVG LQE
Sbjct: 87 AAEAALKMLKGGMLGGIGGNGMEGDGFVGIEMEGECPQSEMKSSSSTQQAECNPVGALQE 146
Query: 687 LCMSRFWPPPSY 722
L + + W P Y
Sbjct: 147 LVVQKGWRLPEY 158
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 378 PVSVLQELLARRG-TVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 518
PV LQEL+ ++G +P+Y + Q G H F V V +G+G
Sbjct: 140 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSG 187
>UniRef50_O75569 Cluster: Interferon-inducible double stranded
RNA-dependent protein kinase activator A; n=23;
Euteleostomi|Rep: Interferon-inducible double stranded
RNA-dependent protein kinase activator A - Homo sapiens
(Human)
Length = 313
Score = 60.5 bits (140), Expect = 4e-08
Identities = 38/119 (31%), Positives = 54/119 (45%)
Frame = +3
Query: 366 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXX 545
P KTP+ VL E + +P YE + + IH PTF +RVTV D+ G G
Sbjct: 31 PGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGDITCTGEGTSKKLAKHR 90
Query: 546 XXXXLLDKLTGATPADQTTNGNVPETGAVVPTFEDKLMGNPVGWLQELCMSRFWPPPSY 722
++ L A+ + VP+ P+ + K NP+G LQEL + W P Y
Sbjct: 91 AAEAAINIL----KANASICFAVPDPLMPDPSKQPKNQLNPIGSLQELAIHHGWRLPEY 145
>UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19;
Euteleostomi|Rep: TAR RNA-binding protein 2 - Homo
sapiens (Human)
Length = 366
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +3
Query: 366 PTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 518
P KTP+S+LQE R G P Y+L++ EG H+P F +RVTV D G G
Sbjct: 27 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQG 77
Score = 33.1 bits (72), Expect = 7.4
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 378 PVSVLQELLARRG-TVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 518
PV LQEL+ ++G +P+Y + Q G H F V + +G+G
Sbjct: 160 PVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSG 207
>UniRef50_UPI0000DB7121 Cluster: PREDICTED: similar to loquacious
CG6866-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to loquacious CG6866-PB, isoform B -
Apis mellifera
Length = 308
Score = 56.4 bits (130), Expect = 7e-07
Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Frame = +3
Query: 369 TKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXXXXXXXXX 548
+KTPVS+LQE++ + P YEL+ G H F Y+V DL+A G GR
Sbjct: 2 SKTPVSILQEMMVKNKITPNYELIHDGGGSHMNVFAYQVKCDDLIASGIGRSKKDAKHEA 61
Query: 549 XXXLLDKLT--------GATPADQTTNGN----VPETGAVVPTFEDKLMGNPVGWLQELC 692
+L+ + A+PA +PE + P D N VG LQ+LC
Sbjct: 62 AKAMLETIATKRGYLQLPASPAQSPIRTPLLPIIPEISRIPP---DIPFVNAVGALQDLC 118
Query: 693 MSRFWPPPSYHAEND 737
+ P Y +D
Sbjct: 119 VENNLQDPKYQQISD 133
>UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia
californica|Rep: Neuron-specific staufen - Aplysia
californica (California sea hare)
Length = 950
Score = 40.3 bits (90), Expect = 0.049
Identities = 22/85 (25%), Positives = 42/85 (49%)
Frame = +3
Query: 333 DEAAKREMESLPTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMG 512
++A + +++ K+ +S++ E+ RR V ++E+++ G H F R TVAD+V G
Sbjct: 565 EDACEEDVDD-SLKSEISLVHEIALRRNMVVQFEVIRETGPPHMKNFLTRCTVADMVTEG 623
Query: 513 TGRXXXXXXXXXXXXLLDKLTGATP 587
G +L++L P
Sbjct: 624 EGNSKKTSKKKAAELMLEELRKLPP 648
>UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease III -
Candidatus Desulfococcus oleovorans Hxd3
Length = 231
Score = 39.5 bits (88), Expect = 0.085
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 384 SVLQELL-ARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGR 521
S+LQEL A G P YE++ G H+ TF RV+ D+ A G+G+
Sbjct: 162 SLLQELTQATDGKAPTYEIIDETGPDHDKTFHCRVSAGDIQAEGSGK 208
>UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to staufen -
Nasonia vitripennis
Length = 587
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 372 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 518
K+PVS++ E +RG +++V G H TF R TV D V +G G
Sbjct: 189 KSPVSLVHETALKRGLSVSFDVVSETGKPHIRTFMTRCTVGDKVTLGEG 237
>UniRef50_Q1VN63 Cluster: DsRNA-specific ribonuclease; n=1;
Psychroflexus torquis ATCC 700755|Rep: DsRNA-specific
ribonuclease - Psychroflexus torquis ATCC 700755
Length = 183
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 369 TKTPVSVLQEL----LARRGTVPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 518
T PV EL + R+ +P YE+V G+ H PTF VTV + A G G
Sbjct: 106 TAAPVDAKTELQEWAMKRKHAMPAYEIVSQTGLAHAPTFHVSVTVLGVTAEGEG 159
>UniRef50_Q5FPZ7 Cluster: Ribonuclease III; n=1; Gluconobacter
oxydans|Rep: Ribonuclease III - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 174
Score = 37.9 bits (84), Expect = 0.26
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 351 EMESLPTKTPVSVLQELLARRGT-VPKYELVQIEGMIHEPTFRYRVTVADLVAMGTG 518
E P K P ++LQE + +G +P YEL+ +G H P F RV+V + GTG
Sbjct: 94 ESADRPHKEPKTLLQEYMLSQGLPLPHYELLSSDGPSHAPVF--RVSVTTMGHTGTG 148
>UniRef50_Q5P9U8 Cluster: Ribonuclease 3; n=2; Anaplasma|Rep:
Ribonuclease 3 - Anaplasma marginale (strain St. Maries)
Length = 232
Score = 37.1 bits (82), Expect = 0.45
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 339 AAKREMESLPTKTPVSVLQELLARRG-TVPKYELVQIEGMIHEPTFRYRVTVADL-VAMG 512
A + M P + P + LQE + RG +P Y+LV G H+P F V++ + +G
Sbjct: 149 ARAQHMSYTPPQDPKTALQEWVQGRGWAMPLYKLVSKSGPEHKPVFAVEVSIQEHGNVLG 208
Query: 513 TGRXXXXXXXXXXXXLLDKLT 575
TG +L K+T
Sbjct: 209 TGSSKKLAEQEAAKLMLKKIT 229
>UniRef50_Q0BTG2 Cluster: Ribonuclease III; n=4;
Rhodospirillales|Rep: Ribonuclease III - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 258
Score = 36.3 bits (80), Expect = 0.79
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 351 EMESLPTKTPVSVLQELLARRGT-VPKYELVQIEGMIHEPTFRYRVTVADLVAMGTGRXX 527
+ ++ P K + LQE G +P Y L + EG H P F V V D V G
Sbjct: 172 QRQTEPPKDAKTALQEWAQGLGLHLPTYRLARREGPPHNPVFWVEVLVGDHVGQGQAGSK 231
Query: 528 XXXXXXXXXXLLDKLTGATPADQTTNG 608
LL ++ T D+ NG
Sbjct: 232 RAAEQLAAQDLLGRIRDKTGPDRDRNG 258
>UniRef50_Q1GTU3 Cluster: Ribonuclease III; n=1; Sphingopyxis
alaskensis|Rep: Ribonuclease III - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 226
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 372 KTPVSVLQE-LLARRGTVPKYELVQIEGMIHEPTFRYRVTVADL 500
K P + LQE LAR P+YE+V EG H P FR V++ L
Sbjct: 153 KHPKAALQEWALARGRRPPEYEIVSREGPDHAPRFRIAVSIGKL 196
>UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 423
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 372 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADL 500
KTP+S++ EL P+Y +++ G H+ TF+ ++ + D+
Sbjct: 4 KTPISLMNELAKANNLNPEYNVIEETGPAHKKTFKVQLKLGDI 46
Score = 34.7 bits (76), Expect = 2.4
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 303 KPNNLQRLPLDEAAKREMESL--PTKTPVSVLQELLARR-GTVPKYELVQIEGMIHEPTF 473
K QR L A K + +S PT +S+L ++L RR P Y LV+ G + + F
Sbjct: 315 KKKKYQRHGLYNAKKVKPKSDIDPTLNSISILGQILQRRHDPAPVYSLVEERGHMMKKEF 374
Query: 474 RYRVTVADLVAMGTG 518
RV V A+G G
Sbjct: 375 TLRVKVGSHEALGVG 389
>UniRef50_Q3AC58 Cluster: Ribonuclease 3; n=1; Carboxydothermus
hydrogenoformans Z-2901|Rep: Ribonuclease 3 -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 235
Score = 35.9 bits (79), Expect = 1.0
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 282 RRYQTRPKPNNLQRLPLDEAAKREMESLPTKTPVSVLQELLAR-RGTVPKYELVQIEGMI 458
R Y + KP NL++LP DE KT LQELL + + V +YE++ EG
Sbjct: 145 RLYGEKLKPENLEQLPKDE-----------KT---TLQELLQKEKNNVLRYEILLEEGPP 190
Query: 459 HEPTFRYRVTVAD-LVAMGTGR 521
H+ F V + D L+A G G+
Sbjct: 191 HQKIFTAGVIINDKLIATGRGK 212
>UniRef50_A4YY80 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 376
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 216 VIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAAKREMESLPTKTP 380
+I G T + SG G H+ H R + T L+RLP +A SLP +TP
Sbjct: 323 LILGKTAYTSGDGGGHLDHDGARAF-TADFLQELERLPSFQAITASRSSLPPRTP 376
>UniRef50_O12982 Cluster: DsRNA adenosine deaminase; n=3;
Xenopus|Rep: DsRNA adenosine deaminase - Xenopus laevis
(African clawed frog)
Length = 1270
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 372 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVAD 497
K P+S+L E + G + +++LV EG H+P F Y V + +
Sbjct: 678 KNPISLLMEHGQKSGNMCEFQLVSQEGPPHDPKFTYTVKIGN 719
>UniRef50_Q99MU3 Cluster: Double-stranded RNA-specific adenosine
deaminase; n=8; Eutheria|Rep: Double-stranded
RNA-specific adenosine deaminase - Mus musculus (Mouse)
Length = 1178
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Frame = +3
Query: 303 KPNNLQRLPLDEAAKREMES-LPT---------KTPVSVLQELLARRGTVPKYELVQIEG 452
+P +L P++E +++ E+ P+ K+PV+ L E + + G ++ L+ EG
Sbjct: 533 QPEDLSHCPMEEDSEKPAEAQAPSSSATSLFSGKSPVTTLLECMHKLGNSCEFRLLSKEG 592
Query: 453 MIHEPTFRYRVTV 491
H+P F+Y V V
Sbjct: 593 PAHDPKFQYCVAV 605
>UniRef50_P55265 Cluster: Double-stranded RNA-specific adenosine
deaminase; n=32; Theria|Rep: Double-stranded
RNA-specific adenosine deaminase - Homo sapiens (Human)
Length = 1226
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 372 KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTV 491
K+PV+ L E + + G ++ L+ EG HEP F+Y V V
Sbjct: 613 KSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAV 652
>UniRef50_Q47A01 Cluster: Putative uncharacterized protein; n=1;
Dechloromonas aromatica RCB|Rep: Putative
uncharacterized protein - Dechloromonas aromatica
(strain RCB)
Length = 1058
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 186 PSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPLDEAAKREMES 362
P+ P V+ T+H + P P R QT KP + PL EA +++MES
Sbjct: 64 PATAAARPASVLSPPTLHRANPVRGPAVAAPTRPQQTAAKPTSSGGEPLPEAVRQDMES 122
>UniRef50_Q3IL48 Cluster: Putative alpha-amylase; n=1;
Pseudoalteromonas haloplanktis TAC125|Rep: Putative
alpha-amylase - Pseudoalteromonas haloplanktis (strain
TAC 125)
Length = 571
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 570 LTGATPADQTTNGNVPETGAVVPTFEDKLMGNPVGWLQELCMSRFWPPPSYHAEND 737
LTG PA +TN N T V T + K + P W Q + WP Y + ND
Sbjct: 15 LTGCKPAP-STNTN---TNNAVTTAQTKAVEQPADWWQSAIFYQIWPRSFYDSNND 66
>UniRef50_Q6SFI8 Cluster: Ribonuclease III; n=2; Bacteria|Rep:
Ribonuclease III - uncultured bacterium 580
Length = 231
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 372 KTPVSVLQELL-ARRGTVPKYELVQIEGMIHEPTFRYRVTVA--DLVAMGTGR 521
K P ++LQE L A++ +P YE++ +EG H F V+ D+ G GR
Sbjct: 154 KDPKTILQEFLQAQKVPLPSYEVINVEGEAHNQLFTVTCVVSKFDVKVEGGGR 206
>UniRef50_Q084T2 Cluster: Polysaccharide biosynthesis protein; n=1;
Shewanella frigidimarina NCIMB 400|Rep: Polysaccharide
biosynthesis protein - Shewanella frigidimarina (strain
NCIMB 400)
Length = 471
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 161 GREYGPPASICGTGF-TTRCYPWNDSA 238
GR+YGP A + TGF T C+ WN SA
Sbjct: 366 GRDYGPGAGVLATGFYTFTCFLWNISA 392
>UniRef50_Q73NX5 Cluster: Ribonuclease 3; n=1; Treponema
denticola|Rep: Ribonuclease 3 - Treponema denticola
Length = 246
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 384 SVLQELLARR-GTVPKYELVQIEGMIHEPTFRYRVTV 491
S+LQEL+ ++ TVPKYEL + G H+ TF + V++
Sbjct: 174 SLLQELVQKKFKTVPKYELKKASGPDHDRTFWFSVSI 210
>UniRef50_Q2IJ20 Cluster: Putative uncharacterized protein
precursor; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
Putative uncharacterized protein precursor -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 312
Score = 34.3 bits (75), Expect = 3.2
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = -2
Query: 673 PTGLPISLSSNVGTTAPVSGTLPLVV*SAGVAPVNLSS---KALAAECFASFFERPVPIA 503
P L S S + T P SGT PL + SAG V +S +++ F + V +
Sbjct: 150 PDTLAASFSMKLPTALPASGTRPLAITSAGQVEVGEASPQVSSISCSTFTTTSATLVDVT 209
Query: 502 TKSATVTLY-RKVGSCIMPSIWTSSYLGTVP 413
S T+T + R V P S TVP
Sbjct: 210 NLSVTITTHGRPVMLFFQPDGSPSQMYVTVP 240
>UniRef50_A6SI61 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 531
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 207 PPGVIHGMTVHGS-GPNGEHIPHGPRRRYQTRPKP 308
P G I G +HG GPNG H PHGP P+P
Sbjct: 4 PNGPIQG-PIHGPMGPNGPHEPHGPNGMSFASPEP 37
>UniRef50_Q4RH09 Cluster: Chromosome undetermined SCAF15077, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF15077, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 123 SINTFVT-TAVGKMEGNTVHPHPSVVPGLPPGV-IHGMTVHGSGPNGEHIPH 272
SIN F T T V +G+T HP P V PPG HG +G +G+H H
Sbjct: 26 SINQFFTATGVIPPQGST-HPQPQVQHQAPPGAPQHGALHAKAGQHGQHNQH 76
>UniRef50_Q29M28 Cluster: GA17171-PA; n=1; Drosophila
pseudoobscura|Rep: GA17171-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 400
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 153 GKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPN 254
G+ +G + P P VPG PG + G + GSGPN
Sbjct: 282 GQGQGPGLGPGPGPVPGPGPGPVPGTSTAGSGPN 315
>UniRef50_UPI0000E4A102 Cluster: PREDICTED: hypothetical protein,
partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 948
Score = 33.5 bits (73), Expect = 5.6
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 147 AVGKMEGNTVHPHPSVVPG-LPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPN 311
A+ + + +H P+ +PG LPP V+H TV + IP P+ +Y P N
Sbjct: 656 ALPTLAPHQIHYRPANIPGPLPPQVLHSPTVPPQVYHPSPIPGPPQHQYHHHPPYN 711
>UniRef50_Q16MI6 Cluster: Putative uncharacterized protein; n=3;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1151
Score = 33.5 bits (73), Expect = 5.6
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 300 PKPNNLQRLPLDEAAKREMESLPTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRY 479
P P+ + P +K ++E P K P S QEL+A R + K EL + ++ + RY
Sbjct: 59 PVPSTAPKSPTSTTSKLKLEKTPFKAPKS--QELVAFRKNIEKNELDMVRNIV-QLNPRY 115
Query: 480 RVTVAD 497
V+ D
Sbjct: 116 LVSSGD 121
>UniRef50_A7F428 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 473
Score = 33.5 bits (73), Expect = 5.6
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = -2
Query: 658 ISLSSNVGTTAPVSGTL-PLVV*SAGV-APVNLSSKALAAECFASFFERPV-PIATKSAT 488
+++S +V P +G P+VV S V +PV +S ++AA +S V P+A+ S+T
Sbjct: 128 VAVSLSVAVPVPSTGPASPVVVTSTSVVSPVAATSTSVAAPVVSSSSSAVVAPVASSSST 187
Query: 487 VTLYRKVGSCIMPSIWTSSYLGTVPRRANSSCKTETGV 374
+ + + + P ANS+CKT+ V
Sbjct: 188 TSSAAVASTSAVVASSGGFGFAYSPYMANSACKTQDQV 225
>UniRef50_A7QF73 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Magnoliophyta|Rep:
Chromosome undetermined scaffold_87, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 563
Score = 33.1 bits (72), Expect = 7.4
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 609 NVPETGAVVPTFEDKLMGNPVGWLQELCMSRFWPPPSYHAENDD 740
N + G TFE+KLM N +G L++L + P P Y A DD
Sbjct: 116 NRDDMGRGDQTFEEKLMRNMLGELEQLLIHASIPYPVYFAFEDD 159
>UniRef50_A7SVV0 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 118
Score = 33.1 bits (72), Expect = 7.4
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 366 PTKTPVSVLQELLAR-RGTVPKYELVQIEGMIHEPTFRYRVTV 491
P K P+S+LQE+ AR + +P ++L+ G H F ++V V
Sbjct: 38 PGKHPISMLQEICARKKWQLPDFQLIFDHGPPHSKQFLFKVAV 80
>UniRef50_A7RYG5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 2534
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 449 RHDT*THFPVQSNCG*FSCNGHWSL-KKRGKALCSQGFTGQVNWCYTS*SD-YQWQCS 616
+H HF +Q C CNGH S+ +RGK C Q C++ +D Y+ QC+
Sbjct: 2218 KHCVPGHFFLQGYCSRCQCNGHGSICDERGKCSCENNTAEQ---CHSGQNDCYKNQCT 2272
>UniRef50_P74368 Cluster: Ribonuclease 3; n=1; Synechocystis sp. PCC
6803|Rep: Ribonuclease 3 - Synechocystis sp. (strain PCC
6803)
Length = 231
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 348 REMESLPTKTPVSVLQE-LLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLV-AMGTG 518
R + +PT S+LQ+ LA+ +P+YEL+ G H F + V VA + G+G
Sbjct: 151 RSPKLVPTMDVKSMLQQWALAKTKQLPEYELINTSGPPHAQEFTFTVKVAGKIHGQGSG 209
>UniRef50_UPI0000E82402 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Gallus gallus|Rep: PREDICTED: hypothetical
protein, partial - Gallus gallus
Length = 334
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 186 PSVVPGLPPGVIH---GMTVHGSGPNGEHIPHGPRRRYQTRP 302
P V P PPG +H G+ HG GP G HG R R + P
Sbjct: 265 PDVSPPGPPGAVHGGGGLPRHGGGPGGAGGVHG-RLRLRLHP 305
>UniRef50_UPI0000E25062 Cluster: PREDICTED: similar to KIAA0290;
n=1; Pan troglodytes|Rep: PREDICTED: similar to KIAA0290
- Pan troglodytes
Length = 915
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 341 RLVQRQSLQVIRFGSGLIAASWTVRNVFTVRSTAVHCHSMDNTGW*TRYH 192
RL R+ LQ+ GSGL+A SW + S ++ C N G+ YH
Sbjct: 53 RLPPRKCLQLGADGSGLVAVSWRLPRQTGAPSHSLPCPGEKNHGFEVLYH 102
>UniRef50_UPI0000D9DDEE Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 171
Score = 32.7 bits (71), Expect = 9.7
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Frame = +3
Query: 147 AVGKMEGNTVHP--HPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQ 320
AVG+ N + H + PPG+ T+ G G G +P P R + P P
Sbjct: 61 AVGQSRPNNLDQTLHGTPYTAAPPGLQAHSTIWGRGTLGATVPASPWSRPPSPPSPRMQP 120
Query: 321 RLPLDEAAKREMESLPTKTPVSVLQELLARRGTVP 425
L A R + P +P V Q RG P
Sbjct: 121 PLTCLPKASRSLRLSPL-SPAPVSQGPCGGRGGSP 154
>UniRef50_UPI0000D57240 Cluster: PREDICTED: similar to CG12598-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG12598-PA, isoform A - Tribolium castaneum
Length = 603
Score = 32.7 bits (71), Expect = 9.7
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +3
Query: 267 PHGPRRRYQTRPKPNNLQRLPLDEAAKREMESLPTKTPVSVLQELLARRGTVPKYELVQI 446
P G +R +P+ + P + K ++ + + PVSVL +L R G KY ++
Sbjct: 8 PGGAVKRSAQKPETGEMAS-PEPKRLKVDLSLMSDQNPVSVLNQL--RVGL--KYNFIEQ 62
Query: 447 EGMIHEPTFRYRVTVADLVAMGTG 518
G H P F+ V V G G
Sbjct: 63 RGPSHAPLFKVAVEVDGQTYYGVG 86
>UniRef50_Q9I8Y2 Cluster: Double-stranded RNA-specific editase; n=9;
Euteleostomi|Rep: Double-stranded RNA-specific editase -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1382
Score = 32.7 bits (71), Expect = 9.7
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 360 SLPT-KTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVAD 497
SLP K PVSVL E R G ++ EG H+P F +RV V +
Sbjct: 737 SLPGGKNPVSVLMEHSQRSGHPIQFIKTGQEGPSHDPRFMFRVKVGE 783
>UniRef50_Q7DAG9 Cluster: Peptide synthetase, putative; n=10;
Mycobacterium tuberculosis complex|Rep: Peptide
synthetase, putative - Mycobacterium tuberculosis
Length = 2520
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 276 PRRRYQTRPKPNNLQRLPLDEAAKREMESLPTKTPVSVLQELLARRGTVPKYELV 440
P R + + +R LDE R + + P TPVS+ Q L A+ +P+ E V
Sbjct: 1465 PERTVSSIDALDGTERARLDEWGNRAVLTAPAPTPVSIPQMLAAQVARIPEAEAV 1519
>UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:
Ribonuclease III - Roseiflexus sp. RS-1
Length = 237
Score = 32.7 bits (71), Expect = 9.7
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 324 LPLDEAAKREMESLPTKT-PVSVLQELLAR----RGTVPKYELVQIEGMIHEPTFRYRVT 488
LPL EA E+ SLP +T PV L AR R P+Y + G H P F V
Sbjct: 145 LPLFEA---ELASLPDRTLPVDYKSRLQARIQAERRVTPRYHEIDRSGPEHRPEFTVEVR 201
Query: 489 VADLVAMGTGR 521
+ +GTG+
Sbjct: 202 AGE-ERLGTGK 211
>UniRef50_A5EBN0 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 79
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 174 VHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLPL 332
+H H P LP +HG++ HG+ + HGP + +P ++ R+P+
Sbjct: 6 IHSHGH--PDLPGAHLHGVSGHGASGHSHVHSHGPAAPHPAQPAVWSILRMPV 56
>UniRef50_A0KEX1 Cluster: LysM domain protein; n=2; Aeromonas|Rep:
LysM domain protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 362
Score = 32.7 bits (71), Expect = 9.7
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 150 VGKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHI 266
+G +EG+T++ S++PG G+ H T++ +GE +
Sbjct: 153 IGMLEGDTLYVQGSLIPGQDYGIYHPGTIYKDKKSGEQL 191
>UniRef50_Q1WDR2 Cluster: Nova; n=3; Echinoida|Rep: Nova -
Paracentrotus lividus (Common sea urchin)
Length = 553
Score = 32.7 bits (71), Expect = 9.7
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = -2
Query: 631 TAPVSGTLPLVV*SA-GVAPVNLSSKALAAECFASFFERPVPIA--TKSATVTLYRKVGS 461
T PV+ P A GV+P S+ A AA A+ + P+A T SAT L +G
Sbjct: 253 TGPVANANPTGSPFAEGVSPSVASNLAAAAAAAAAMGKPQAPVAGQTLSATPALPHPIGG 312
Query: 460 CI-MPSIWTSSYLGTVPRRANSSCKT 386
+ +PS+ SS L T P +S T
Sbjct: 313 GLTIPSMMISSRLPTNPTPVHSQADT 338
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,424,479
Number of Sequences: 1657284
Number of extensions: 19068940
Number of successful extensions: 54323
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 51005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54199
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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