Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6b01
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical pr... 32 0.37
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 32 0.49
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 31 0.65
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 4.6
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 4.6
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 4.6
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.6
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 4.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 4.6
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 4.6
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 4.6
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical
protein F16B12.2 protein.
Length = 259
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 497 FSCNGHWSLKKRGKALCSQGFTG 565
F+C+ H S + GK +CSQGF G
Sbjct: 64 FNCHNHGSCEVPGKCMCSQGFFG 86
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 31.9 bits (69), Expect = 0.49
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 663 NPVGWLQELCMSRFWPPPSYHAE 731
NP+ + ELC R W PPS+ E
Sbjct: 706 NPISLIMELCAKRRWNPPSFSCE 728
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 31.5 bits (68), Expect = 0.65
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +3
Query: 147 AVGKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRL 326
A+G+ G+ P P+ PG P + G H H HG R + P+N RL
Sbjct: 970 AIGERRGSVPIPLPAASPGGTP-CVSGNLSHEHNMRA-HAFHGANRMIEPNGIPSNAMRL 1027
Query: 327 PLDEAAKREMESLPTKTPVSVLQELLARRG 416
AK + P S Q+ +++G
Sbjct: 1028 VNGHEAKTNGARRQQQQPPSSQQQPQSQQG 1057
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 186 PSVVPGLPPGV-IHGMTVHGSGPNGEHI-PHGPRRRYQTRPKPNNLQRLPLDEAAKREME 359
P++ P P + G ++ + +G + P G T P P+D ++ ME
Sbjct: 430 PTIAPASSPIINASGSSIPAASTSGISLFPSGGVTSSLTTPSTTADTHTPIDNKIEQAME 489
Query: 360 SLPTKTPVSVLQELLARRGTVPKYELVQIEGMIHEPTFRYRVTVADLV 503
+ T +V +E+ R T+ + E Q+ +E T+ + DL+
Sbjct: 490 LVKTHLTYAVREEVDTLRNTIAELE-YQMRESQYECTYYRQNCAPDLI 536
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 751 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 784
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 354 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 387
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 714 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 747
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 226 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 259
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 751 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 784
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 354 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 387
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 714 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 747
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 4.6
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = -2
Query: 670 TGLPISLSSNVGTTAPVSGTLPLVV*SAGVAPVNLSSKALAAECFASFFERPVPIATKS- 494
+ LPI+ SS + + S T P+V+ S+ + + + + A ++ ++ S
Sbjct: 43 SALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASSSSY 102
Query: 493 ATV-TLYRKVGSCIMPSIWTSSYLGTVPRRANSSCKTETGVFVGS--DSISLLAASS 332
ATV T+ GS I P +SS +G+ A+SS GS +++++ SS
Sbjct: 103 ATVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSS 159
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 4.6
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = -2
Query: 670 TGLPISLSSNVGTTAPVSGTLPLVV*SAGVAPVNLSSKALAAECFASFFERPVPIATKS- 494
+ LPI+ SS + + S T P+V+ S+ + + + + A ++ ++ S
Sbjct: 250 SALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASSSSY 309
Query: 493 ATV-TLYRKVGSCIMPSIWTSSYLGTVPRRANSSCKTETGVFVGS--DSISLLAASS 332
ATV T+ GS I P +SS +G+ A+SS GS +++++ SS
Sbjct: 310 ATVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSS 366
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 4.6
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = -2
Query: 670 TGLPISLSSNVGTTAPVSGTLPLVV*SAGVAPVNLSSKALAAECFASFFERPVPIATKS- 494
+ LPI+ SS + + S T P+V+ S+ + + + + A ++ ++ S
Sbjct: 250 SALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASSSSY 309
Query: 493 ATV-TLYRKVGSCIMPSIWTSSYLGTVPRRANSSCKTETGVFVGS--DSISLLAASS 332
ATV T+ GS I P +SS +G+ A+SS GS +++++ SS
Sbjct: 310 ATVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSS 366
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 226 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 259
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 354 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 387
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 180 PHPSVVPGL--PPGVIHGMTVHGSGPNGEHIPHG 275
P P +PGL PPG T HGSG +G P G
Sbjct: 693 PGPPGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 726
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 464 THFPVQSNCG*FSCNGHWSLKKR 532
T+ P N G F+ NGHW L +R
Sbjct: 423 TNLPKIDNVGSFNVNGHWRLIRR 445
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,256,413
Number of Sequences: 27780
Number of extensions: 460725
Number of successful extensions: 1555
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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