Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6b01
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.99 
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              24   1.3  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   5.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 210 PGVIHGMT-VHGSGPNGEHIPHGPRR 284
           PG++ G+  V G G  G ++P+G +R
Sbjct: 875 PGLLQGVQQVFGQGVQGMNVPYGMQR 900


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 466 GSCIMPSIWTSSYLGTVPRRANSSCKTETGV 374
           G C+     T   L T      S CKTETG+
Sbjct: 9   GFCVCVGALTIEELKTRLHTEQSVCKTETGI 39


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = +3

Query: 150 VGKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLP 329
           V     N+VH H     GL  G  H         N EH P GP+      P P   ++ P
Sbjct: 37  VSNSASNSVHGHRE---GL--GRRHRYNFQLKPYNPEHKPPGPKDLVYLEPSPPFCEKNP 91


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = +3

Query: 150 VGKMEGNTVHPHPSVVPGLPPGVIHGMTVHGSGPNGEHIPHGPRRRYQTRPKPNNLQRLP 329
           V     N+VH H     GL  G  H         N EH P GP+      P P   ++ P
Sbjct: 38  VSNSASNSVHGHRE---GL--GRRHRYNFQLKPYNPEHKPPGPKDLVYLEPSPPFCEKNP 92


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 152 HSRSYKCIYRNLLLKMKRIQ 93
           H+ +Y C+ RNL  ++   Q
Sbjct: 679 HNGNYSCVARNLAAEVSHTQ 698


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 515 WSLKKRGKALCSQGFTGQV 571
           W + KRGK + S  + G V
Sbjct: 147 WDVDKRGKIMLSFAWIGSV 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,833
Number of Sequences: 438
Number of extensions: 5369
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)