Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a23
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.8  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 576 YWRLGQSQSLCDFITANV 523
           Y+RL +++S C F+ A V
Sbjct: 34  YFRLSKAKSFCTFVAALV 51


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 435 DRQEQSVGLQVSTKFEQSR 491
           D + QSVGLQ+ T  E+ R
Sbjct: 114 DERFQSVGLQIDTVREKRR 132


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 576 YWRLGQSQSLCDFITANV 523
           Y+RL ++++ C  +TA V
Sbjct: 397 YFRLSKTKTFCTLVTALV 414


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.128    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,788
Number of Sequences: 336
Number of extensions: 2692
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.3 bits)