BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6a23
(593 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021433-1|AAX33581.1| 378|Drosophila melanogaster GH20159p pro... 30 2.7
AY121664-1|AAM51991.1| 378|Drosophila melanogaster RE10847p pro... 30 2.7
AJ250870-4|CAC17711.1| 409|Drosophila melanogaster chromatin co... 30 2.7
AJ250870-3|CAC17710.1| 394|Drosophila melanogaster chromatin co... 30 2.7
AJ250870-2|CAC17709.1| 395|Drosophila melanogaster chromatin co... 30 2.7
AJ250870-1|CAC17708.1| 410|Drosophila melanogaster chromatin co... 30 2.7
AJ250869-1|CAC17707.1| 395|Drosophila melanogaster chromatin co... 30 2.7
AJ250868-1|CAC17706.1| 410|Drosophila melanogaster chromatin co... 30 2.7
AJ250867-1|CAC17705.1| 394|Drosophila melanogaster chromatin co... 30 2.7
AJ250866-1|CAC17704.1| 409|Drosophila melanogaster chromatin co... 30 2.7
AF218310-1|AAF67101.1| 410|Drosophila melanogaster Ultrabithora... 30 2.7
AF213338-1|AAF25886.1| 374|Drosophila melanogaster disco intera... 30 2.7
AF182444-3|AAF03831.1| 309|Drosophila melanogaster disco-intera... 30 2.7
AF182444-2|AAF03832.1| 395|Drosophila melanogaster disco-intera... 30 2.7
AF182444-1|AAF03833.1| 410|Drosophila melanogaster disco-intera... 30 2.7
AF182154-1|AAD56033.1| 395|Drosophila melanogaster dsRBD-contai... 30 2.7
AF175713-1|AAD50503.1| 309|Drosophila melanogaster dsRBD-contai... 30 2.7
AF175712-3|AAD50504.1| 309|Drosophila melanogaster dsRBD-contai... 30 2.7
AF175712-2|AAD50506.1| 395|Drosophila melanogaster dsRBD-contai... 30 2.7
AF175712-1|AAD50505.1| 410|Drosophila melanogaster dsRBD-contai... 30 2.7
AF175711-1|AAD50502.1| 410|Drosophila melanogaster dsRBD-contai... 30 2.7
AE014298-3169|AAN09008.1| 409|Drosophila melanogaster CG17686-P... 30 2.7
AE014298-3168|AAF45390.2| 409|Drosophila melanogaster CG17686-P... 30 2.7
AE014298-3167|AAN09007.1| 410|Drosophila melanogaster CG17686-P... 30 2.7
AE014298-3166|AAN09006.1| 395|Drosophila melanogaster CG17686-P... 30 2.7
AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p pro... 29 4.8
AF289494-1|AAG40807.1| 382|Drosophila melanogaster aspartyl bet... 29 4.8
AF289493-1|AAG40806.1| 785|Drosophila melanogaster aspartyl bet... 29 4.8
AE013599-2185|AAM70948.2| 556|Drosophila melanogaster CG8421-PE... 29 4.8
AE013599-2184|AAF58064.2| 556|Drosophila melanogaster CG8421-PD... 29 4.8
AE013599-2183|AAF58063.2| 382|Drosophila melanogaster CG8421-PB... 29 4.8
AE013599-2182|AAM70947.1| 785|Drosophila melanogaster CG8421-PA... 29 4.8
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 28 8.3
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 28 8.3
AF371281-1|AAK54737.1| 656|Drosophila melanogaster voltage-depe... 28 8.3
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB... 28 8.3
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 28 8.3
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 28 8.3
>BT021433-1|AAX33581.1| 378|Drosophila melanogaster GH20159p
protein.
Length = 378
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 74 IKEEPISVNDEPSVDNIEDNTSAS 97
>AY121664-1|AAM51991.1| 378|Drosophila melanogaster RE10847p
protein.
Length = 378
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 74 IKEEPISVNDEPSVDNIEDNTSAS 97
>AJ250870-4|CAC17711.1| 409|Drosophila melanogaster chromatin
component KLETT protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 105 IKEEPISVNDEPSVDNIEDNTSAS 128
>AJ250870-3|CAC17710.1| 394|Drosophila melanogaster chromatin
component KLETT protein.
Length = 394
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 90 IKEEPISVNDEPSVDNIEDNTSAS 113
>AJ250870-2|CAC17709.1| 395|Drosophila melanogaster chromatin
component KLETT protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 91 IKEEPISVNDEPSVDNIEDNTSAS 114
>AJ250870-1|CAC17708.1| 410|Drosophila melanogaster chromatin
component KLETT protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 106 IKEEPISVNDEPSVDNIEDNTSAS 129
>AJ250869-1|CAC17707.1| 395|Drosophila melanogaster chromatin
component KLETT protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 91 IKEEPISVNDEPSVDNIEDNTSAS 114
>AJ250868-1|CAC17706.1| 410|Drosophila melanogaster chromatin
component KLETT protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 106 IKEEPISVNDEPSVDNIEDNTSAS 129
>AJ250867-1|CAC17705.1| 394|Drosophila melanogaster chromatin
component KLETT protein.
Length = 394
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 90 IKEEPISVNDEPSVDNIEDNTSAS 113
>AJ250866-1|CAC17704.1| 409|Drosophila melanogaster chromatin
component KLETT protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 105 IKEEPISVNDEPSVDNIEDNTSAS 128
>AF218310-1|AAF67101.1| 410|Drosophila melanogaster Ultrabithorax
binding protein 1 protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 106 IKEEPISVNDEPSVDNIEDNTSAS 129
>AF213338-1|AAF25886.1| 374|Drosophila melanogaster disco
interacting protein isoformTO67 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 74 IKEEPISVNDEPSVDNIEDNTSAS 97
>AF182444-3|AAF03831.1| 309|Drosophila melanogaster
disco-interacting protein protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 5 IKEEPISVNDEPSVDNIEDNTSAS 28
>AF182444-2|AAF03832.1| 395|Drosophila melanogaster
disco-interacting protein protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 91 IKEEPISVNDEPSVDNIEDNTSAS 114
>AF182444-1|AAF03833.1| 410|Drosophila melanogaster
disco-interacting protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 106 IKEEPISVNDEPSVDNIEDNTSAS 129
>AF182154-1|AAD56033.1| 395|Drosophila melanogaster
dsRBD-containing protein dip1-b splice isoform protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 91 IKEEPISVNDEPSVDNIEDNTSAS 114
>AF175713-1|AAD50503.1| 309|Drosophila melanogaster
dsRBD-containing protein dip1-a splice isoform protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 5 IKEEPISVNDEPSVDNIEDNTSAS 28
>AF175712-3|AAD50504.1| 309|Drosophila melanogaster
dsRBD-containing protein dip1-a protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 5 IKEEPISVNDEPSVDNIEDNTSAS 28
>AF175712-2|AAD50506.1| 395|Drosophila melanogaster
dsRBD-containing protein dip1-b protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 91 IKEEPISVNDEPSVDNIEDNTSAS 114
>AF175712-1|AAD50505.1| 410|Drosophila melanogaster
dsRBD-containing protein dip1-c protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 106 IKEEPISVNDEPSVDNIEDNTSAS 129
>AF175711-1|AAD50502.1| 410|Drosophila melanogaster
dsRBD-containing protein dip1-c splice isoform protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 106 IKEEPISVNDEPSVDNIEDNTSAS 129
>AE014298-3169|AAN09008.1| 409|Drosophila melanogaster CG17686-PB,
isoform B protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 105 IKEEPISVNDEPSVDNIEDNTSAS 128
>AE014298-3168|AAF45390.2| 409|Drosophila melanogaster CG17686-PA,
isoform A protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 105 IKEEPISVNDEPSVDNIEDNTSAS 128
>AE014298-3167|AAN09007.1| 410|Drosophila melanogaster CG17686-PD,
isoform D protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 106 IKEEPISVNDEPSVDNIEDNTSAS 129
>AE014298-3166|AAN09006.1| 395|Drosophila melanogaster CG17686-PC,
isoform C protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 148 IKELPPGLEEEPSAENDEDGTSAT 219
IKE P + +EPS +N ED TSA+
Sbjct: 91 IKEEPISVNDEPSVDNIEDNTSAS 114
>AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p
protein.
Length = 556
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 82 KNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDEDGTS 213
++ + + LTE L E+ E + P +E P +EE + DE+ +
Sbjct: 130 EDEDEEPLTEELEEELEEEEEPTEEDEPAADEEYEEDEDEENNA 173
>AF289494-1|AAG40807.1| 382|Drosophila melanogaster aspartyl
beta-hydroxylase variant2 protein.
Length = 382
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 82 KNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDEDGTS 213
++ + + LTE L E+ E + P +E P +EE + DE+ +
Sbjct: 130 EDEDEEPLTEELEEELEEEEEPTEEDEPAADEEYEEDEDEENNA 173
>AF289493-1|AAG40806.1| 785|Drosophila melanogaster aspartyl
beta-hydroxylase variant1 protein.
Length = 785
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 82 KNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDEDGTS 213
++ + + LTE L E+ E + P +E P +EE + DE+ +
Sbjct: 130 EDEDEEPLTEELEEELEEEEEPTEEDEPAADEEYEEDEDEENNA 173
>AE013599-2185|AAM70948.2| 556|Drosophila melanogaster CG8421-PE,
isoform E protein.
Length = 556
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 82 KNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDEDGTS 213
++ + + LTE L E+ E + P +E P +EE + DE+ +
Sbjct: 130 EDEDEEPLTEELEEELEEEEEPTEEDEPAADEEYEEDEDEENNA 173
>AE013599-2184|AAF58064.2| 556|Drosophila melanogaster CG8421-PD,
isoform D protein.
Length = 556
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 82 KNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDEDGTS 213
++ + + LTE L E+ E + P +E P +EE + DE+ +
Sbjct: 130 EDEDEEPLTEELEEELEEEEEPTEEDEPAADEEYEEDEDEENNA 173
>AE013599-2183|AAF58063.2| 382|Drosophila melanogaster CG8421-PB,
isoform B protein.
Length = 382
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 82 KNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDEDGTS 213
++ + + LTE L E+ E + P +E P +EE + DE+ +
Sbjct: 130 EDEDEEPLTEELEEELEEEEEPTEEDEPAADEEYEEDEDEENNA 173
>AE013599-2182|AAM70947.1| 785|Drosophila melanogaster CG8421-PA,
isoform A protein.
Length = 785
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 82 KNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDEDGTS 213
++ + + LTE L E+ E + P +E P +EE + DE+ +
Sbjct: 130 EDEDEEPLTEELEEELEEEEEPTEEDEPAADEEYEEDEDEENNA 173
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous protein
protein.
Length = 1091
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 289 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKF 468
AE VD K++ ++ ++YKD S+Y D S T+ + ++ A
Sbjct: 924 AEECRQQVDVLGKMQLQMEKLYKDLSEYYA----FDPSKYTMEEFFADIKTFKDAFQAAH 979
Query: 469 QPNLNSREEIERFR 510
N+ REE+E+ R
Sbjct: 980 NDNVRVREELEKKR 993
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p protein.
Length = 1091
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 289 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKF 468
AE VD K++ ++ ++YKD S+Y D S T+ + ++ A
Sbjct: 924 AEECRQQVDVLGKMQLQMEKLYKDLSEYYA----FDPSKYTMEEFFADIKTFKDAFQAAH 979
Query: 469 QPNLNSREEIERFR 510
N+ REE+E+ R
Sbjct: 980 NDNVRVREELEKKR 993
>AF371281-1|AAK54737.1| 656|Drosophila melanogaster
voltage-dependent calcium channelalpha13 subunit
protein.
Length = 656
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 331 ERELAEMYKDNSDYQTDRSEADSSST 408
E LAE Y D Y RSEADSS+T
Sbjct: 23 EETLAENYSDGM-YDESRSEADSSTT 47
>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
protein.
Length = 2893
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 331 ERELAEMYKDNSDYQTDRSEADSSST 408
E LAE Y D Y RSEADSS+T
Sbjct: 1189 EETLAENYSDGM-YDESRSEADSSTT 1213
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 289 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKF 468
AE VD K++ ++ ++YKD S+Y D S T+ + ++ A
Sbjct: 924 AEECRQQVDVLGKMQLQMEKLYKDLSEYYA----FDPSKYTMEEFFADIKTFKDAFQAAH 979
Query: 469 QPNLNSREEIERFR 510
N+ REE+E+ R
Sbjct: 980 NDNVRVREELEKKR 993
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 289 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKF 468
AE VD K++ ++ ++YKD S+Y D S T+ + ++ A
Sbjct: 924 AEECRQQVDVLGKMQLQMEKLYKDLSEYYA----FDPSKYTMEEFFADIKTFKDAFQAAH 979
Query: 469 QPNLNSREEIERFR 510
N+ REE+E+ R
Sbjct: 980 NDNVRVREELEKKR 993
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.311 0.128 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,710,623
Number of Sequences: 53049
Number of extensions: 590444
Number of successful extensions: 1484
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -