Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a22
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir relat...    67   8e-12
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    46   2e-05
Z50177-6|CAA90547.1|  287|Caenorhabditis elegans Hypothetical pr...    39   0.002
Z50177-4|CAA90546.1|  287|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z50177-5|CAE46663.1|  289|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF016672-7|AAB66119.1|  378|Caenorhabditis elegans Vig (drosophi...    29   2.7  
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    28   4.6  
AC103567-4|AAL35731.2|  598|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir related
           protein 2.4 protein.
          Length = 299

 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 35/87 (40%), Positives = 46/87 (52%)
 Frame = +1

Query: 346 QLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVSFADAQPTKTHMXX 525
           Q  +  K I V  GAG+ST + +PDFRG  GVWTL+ EGK     V F  A+P  +H   
Sbjct: 50  QAKQTGKPIFVLIGAGVSTGSKLPDFRGKQGVWTLQAEGKHAE-GVDFQVARPGVSHKSI 108

Query: 526 XXXXXXXXXXXXVSQNIDGLHLKSGVP 606
                       ++QN+DGL  K G+P
Sbjct: 109 LALHKAGYIKTIITQNVDGLDRKVGIP 135


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = +1

Query: 346 QLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVW 444
           +L K  KHI+V TGAG+S S GIPDFR  +G++
Sbjct: 140 ELFKTKKHILVLTGAGVSVSCGIPDFRSKDGIY 172


>Z50177-6|CAA90547.1|  287|Caenorhabditis elegans Hypothetical
           protein F46G10.3 protein.
          Length = 287

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
 Frame = +1

Query: 349 LVKDSKHIVVHTGAGISTSAGIPDFRGPN-GVWT---LE--------KEGK-------KP 471
           LV     +++ TGAGIST +GIPD+R  + G++T   LE        K  K       + 
Sbjct: 23  LVGTVDKLLIITGAGISTESGIPDYRSKDVGLYTKTALEPIYFQDFMKSKKCRQRYWSRS 82

Query: 472 TIN-VSFADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSG 600
            +N   FA A P   H               ++QN+DGLHLK+G
Sbjct: 83  YLNWPRFAQALPNFNHYALSKWEAANKFHWLITQNVDGLHLKAG 126


>Z50177-4|CAA90546.1|  287|Caenorhabditis elegans Hypothetical
           protein F46G10.7a protein.
          Length = 287

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
 Frame = +1

Query: 370 IVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKP-----------------TINV----S 486
           ++V +GAGIST +GIPD+R  + V    +   KP                 + N      
Sbjct: 30  LLVISGAGISTESGIPDYRSKD-VGLYARIAHKPIYFQDYMRSNRCRQRYWSRNFLAWPR 88

Query: 487 FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSG 600
           F  A P   H               ++QN+DGLHLK+G
Sbjct: 89  FGQAAPNINHYALSKWEASDRFQWLITQNVDGLHLKAG 126


>Z50177-5|CAE46663.1|  289|Caenorhabditis elegans Hypothetical
           protein F46G10.7b protein.
          Length = 289

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 487 FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSG 600
           F  A P   H               ++QN+DGLHLK+G
Sbjct: 91  FGQAAPNINHYALSKWEASDRFQWLITQNVDGLHLKAG 128


>AF016672-7|AAB66119.1|  378|Caenorhabditis elegans Vig (drosophila
           vasa intronic gene)ortholog protein 1, isoform a
           protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 391 GISTSAGIPDFRGPNGVWTLE-KEGKKPTINVSFADAQPTK 510
           G    A  P  RG  G +T E +EG++P   VSF D Q T+
Sbjct: 111 GGERGAARPAGRGGRGGFTRENREGEEPKQEVSFEDGQDTR 151


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = +1

Query: 259  SPYEN--KGILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGP 432
            SPY    K +L   E   + +K N K   +  L+    H   H   G S  +   D    
Sbjct: 1675 SPYFTTLKSVLKTDESIQTGEKKNVKFAAIDDLIV---HDAPHPTDGYSNRSTQSDNFEM 1731

Query: 433  NGVWTLEKE--GKKPTINVSFAD 495
            N +W LEKE   +    N++FA+
Sbjct: 1732 NQIWDLEKEVIRQLKRDNITFAE 1754


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = +1

Query: 259  SPYEN--KGILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGP 432
            SPY    K +L   E   + +K N K   +  L+    H   H   G S  +   D    
Sbjct: 1675 SPYFTTLKSVLKTDESIQTGEKKNVKFAAIDDLIV---HDAPHPTDGYSNRSTQSDNFEM 1731

Query: 433  NGVWTLEKE--GKKPTINVSFAD 495
            N +W LEKE   +    N++FA+
Sbjct: 1732 NQIWDLEKEVIRQLKRDNITFAE 1754


>AC103567-4|AAL35731.2|  598|Caenorhabditis elegans Hypothetical
           protein Y51F10.4 protein.
          Length = 598

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 337 LLAQLVKDSKHIVVHTGAG--ISTSAGIPD-FRGPNGVWTLEKEGK 465
           ++AQL K S+ +   T  G   S +A IP+    P  V T+EKEGK
Sbjct: 539 IVAQLNKKSEILANATAEGEAASEAAKIPEKLAPPENVETMEKEGK 584


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,710,329
Number of Sequences: 27780
Number of extensions: 323705
Number of successful extensions: 743
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)