Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a19
         (525 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SL02 Cluster: Chromosome 17 SCAF14563, whole genome s...    36   0.57 
UniRef50_A5UXU7 Cluster: Ferredoxin-like protein; n=3; Chlorofle...    36   0.75 
UniRef50_Q2QMH6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_A6C4N0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q234P6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q18647 Cluster: Putative uncharacterized protein C46A5....    33   4.0  
UniRef50_UPI0000EBCCA9 Cluster: PREDICTED: hypothetical protein;...    32   7.0  
UniRef50_UPI00004988E7 Cluster: receptor protein kinase; n=2; En...    32   9.3  
UniRef50_Q1M9M2 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  
UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaste...    32   9.3  

>UniRef50_Q4SL02 Cluster: Chromosome 17 SCAF14563, whole genome
           shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 17
           SCAF14563, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 608

 Score = 35.9 bits (79), Expect = 0.57
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -1

Query: 222 HSIVNCDQRSSAAARSTISGGVTGRWASAATASNCGHNS 106
           HS  N D   S++++ST SG ++GR    + + +CGH+S
Sbjct: 174 HSHTNSDSGRSSSSKSTGSGSLSGRGQPLSDSGSCGHSS 212


>UniRef50_A5UXU7 Cluster: Ferredoxin-like protein; n=3;
           Chloroflexaceae|Rep: Ferredoxin-like protein -
           Roseiflexus sp. RS-1
          Length = 114

 Score = 35.5 bits (78), Expect = 0.75
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +1

Query: 19  KDKISKYRKFTVQNKSKMCDRMDAINKLQTVMSAIRGGCSGCPSPCNSTRNCTPC---CS 189
           K  +++Y +       + CD       L  +++ + G      +PC   R  TPC   CS
Sbjct: 3   KPHMNRYARHIFICTGRFCDPQGQAIHLYALLARLLGPLGRYENPCRVKRGTTPCLGVCS 62

Query: 190 GGSLVTVY 213
           GG +  VY
Sbjct: 63  GGPIAVVY 70


>UniRef50_Q2QMH6 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 125

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 257 AAIGRGGWPIANTAL*TVTRDPPLQHGVQFLVELQGDGHPLQPPR-IADITVCNL 96
           A  GR  WP    A   V R+   +HG+ FL   QG G   QP R I  IT  N+
Sbjct: 71  AGRGRRRWPEVEEAEKEVARERANKHGILFLQLWQGSGGTKQPNRPITRITNLNI 125


>UniRef50_A6C4N0 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 231

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 94  NKLQTVMSAIRGGCSGCPSPCNSTRNCTPCCSGG 195
           ++ Q +M      CS C  PCN+  +C PC +GG
Sbjct: 55  HRAQRMMKHCCNPCSSC-DPCNTCNSCDPCGAGG 87


>UniRef50_Q234P6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1308

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 133 CSGCPSPCNSTRNCTPCCSGGSLVTVYN 216
           C    S C+ST NCT C SG  L+T+ N
Sbjct: 345 CDNNCSTCDSTNNCTSCNSGYFLLTISN 372


>UniRef50_Q18647 Cluster: Putative uncharacterized protein C46A5.4;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein C46A5.4 - Caenorhabditis elegans
          Length = 1432

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 13  FTKDKISKYRKFTVQNKSKMCDRMDAINKLQTVMSAIRGGCSGCPSPCNST 165
           FT D+I + RK T+     +CD  D +  +Q    ++      CP  CNST
Sbjct: 587 FTVDQIDEIRKTTMARI--ICDNTDTVTHVQHHAFSLPDDYGNCPLSCNST 635


>UniRef50_UPI0000EBCCA9 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 384

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +1

Query: 130 GCSGCPSPCN--STRNCTPCCSGGSLVTVYNAVLAIGQPPRP 249
           G SGCPSP    S    TPC   GS V    A   +  PP P
Sbjct: 266 GASGCPSPVGLASAGPPTPCTPSGSRVAPSKAAPRLWGPPGP 307


>UniRef50_UPI00004988E7 Cluster: receptor protein kinase; n=2;
            Entamoeba histolytica HM-1:IMSS|Rep: receptor protein
            kinase - Entamoeba histolytica HM-1:IMSS
          Length = 2128

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +1

Query: 124  RGGCSGCPSPCN----STRNCTPCCSGGSLVTVYNAVLAIG 234
            +G C  C S C     ++ NCT C +G +L T+ N  +++G
Sbjct: 1560 KGKCLQCSSNCKECILTSTNCTTCYTGYTLNTITNTCISVG 1600


>UniRef50_Q1M9M2 Cluster: Putative uncharacterized protein; n=1;
           Rhizobium leguminosarum bv. viciae 3841|Rep: Putative
           uncharacterized protein - Rhizobium leguminosarum bv.
           viciae (strain 3841)
          Length = 164

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -2

Query: 176 VQFLVELQGDGHP--LQPPRIADITVCN 99
           VQ++VELQ  GHP  L  P I ++  CN
Sbjct: 120 VQYVVELQAGGHPDILAEPNILELNACN 147


>UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaster
           subgroup|Rep: CG17377-PC, isoform C - Drosophila
           melanogaster (Fruit fly)
          Length = 287

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
 Frame = +1

Query: 52  VQNKSKMCDRMDAINKLQTVMSAIRGGCSGC-PSPCNSTRNC----TPCCSGGSL 201
           V NK   C    A N        + GGC GC P  CN +  C     PCC   SL
Sbjct: 74  VNNKRMRCAATGAPNGGAGCGGRVAGGCCGCGPCCCNVSPCCGPHSPPCCGSHSL 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,542,108
Number of Sequences: 1657284
Number of extensions: 9614416
Number of successful extensions: 28972
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28898
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)