Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a19
         (525 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   0.67 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   1.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.7  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.3  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 148  SPCNSTRNCTPCCSGGSLVTVYNAVLAIGQPPRPIAAFDKATIAIGHHGRNI 303
            SP  +  + +P    GS+ T  + ++ + Q P P+   D + ++  HH +N+
Sbjct: 1009 SPSLNESSLSPNLWHGSIETSTDTLVPVDQYPPPLGPIDTSALST-HHEQNL 1059


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 148  SPCNSTRNCTPCCSGGSLVTVYNAVLAIGQPPRPIAAFDKATIAIGHHGRNI 303
            SP  +  + +P    GS+ T  + ++ + Q P P+   D + ++  HH +N+
Sbjct: 1007 SPGLNESSLSPNLWHGSIETSTDTLVPVDQYPPPLGPIDTSALST-HHEQNL 1057


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 475  WKLHYQREYN*YVLKKK 525
            +KLHY+ + N YVLK K
Sbjct: 971  FKLHYKVQNNKYVLKLK 987


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 208 VYNAVLAIGQPPRP 249
           +YN VL +G PP P
Sbjct: 615 MYNGVLTLGLPPGP 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,897
Number of Sequences: 2352
Number of extensions: 10925
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)