Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a18
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93393-3|CAB54438.2|  388|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z93393-2|CAB07689.2|  890|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U67954-8|AAB52608.2|  782|Caenorhabditis elegans Sulfate permeas...    28   5.1  
AY954524-1|AAX34432.2|  762|Caenorhabditis elegans anion transpo...    28   5.1  
AY887909-1|AAX34421.1|  782|Caenorhabditis elegans anion transpo...    28   5.1  
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z93393-3|CAB54438.2|  388|Caenorhabditis elegans Hypothetical
           protein Y48E1B.2b protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 400 RSTTWNSLKLLKLCKRRASKALDRLTTTPMP 492
           +ST +N+L    LCK RA   +DR TT+  P
Sbjct: 15  KSTMFNALLQSDLCKVRAVDLVDRATTSIWP 45


>Z93393-2|CAB07689.2|  890|Caenorhabditis elegans Hypothetical
           protein Y48E1B.2a protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 400 RSTTWNSLKLLKLCKRRASKALDRLTTTPMP 492
           +ST +N+L    LCK RA   +DR TT+  P
Sbjct: 517 KSTMFNALLQSDLCKVRAVDLVDRATTSIWP 547


>U67954-8|AAB52608.2|  782|Caenorhabditis elegans Sulfate permease
           family protein 3 protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 323 PKFHWSPSF----AGGLQFAGASVHQRFLHARLRGIP 421
           PK+ WS SF    +GGL  A  SV Q    A + G+P
Sbjct: 52  PKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVP 88


>AY954524-1|AAX34432.2|  762|Caenorhabditis elegans anion
           transporter SULP-3b protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 323 PKFHWSPSF----AGGLQFAGASVHQRFLHARLRGIP 421
           PK+ WS SF    +GGL  A  SV Q    A + G+P
Sbjct: 52  PKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVP 88


>AY887909-1|AAX34421.1|  782|Caenorhabditis elegans anion
           transporter SULP-3a protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 323 PKFHWSPSF----AGGLQFAGASVHQRFLHARLRGIP 421
           PK+ WS SF    +GGL  A  SV Q    A + G+P
Sbjct: 52  PKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVP 88


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 658 LCSTNSCTLSM-SSTSCRGGFGGSRTGWKTSLAPRGAVDNPASISGRGNLG 509
           L S++SC  +  +STS  G FG   + + +  +  GA     S++G  ++G
Sbjct: 302 LSSSSSCFAAKPTSTSAGGSFGNQPSSFSSKPSFGGAFGASTSVTGSSSMG 352


>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
           protein C28A5.2 protein.
          Length = 1218

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 613 CR-GGFGGSRTGWKTSLAPRGAVDNPASISGR 521
           CR GGF     G  + +AP   + NP +++GR
Sbjct: 878 CRIGGFSHGLNGELSRVAPVNCISNPETVNGR 909


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,964,470
Number of Sequences: 27780
Number of extensions: 321465
Number of successful extensions: 1154
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)