Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a10
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071064-1|AAL48686.1|  220|Drosophila melanogaster RE14241p pro...    30   2.9  
AE014297-1726|AAF54971.1|  220|Drosophila melanogaster CG9588-PA...    30   2.9  
AY060768-1|AAL28316.1|  158|Drosophila melanogaster GH23035p pro...    29   3.8  
AE014296-2015|AAF50021.1|  158|Drosophila melanogaster CG6038-PA...    29   3.8  

>AY071064-1|AAL48686.1|  220|Drosophila melanogaster RE14241p
           protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 375 LIGVKGFPSLTITVYKILLARMTFHCMR 292
           L+  +GFP   I VY++ LAR T  C++
Sbjct: 44  LVDAEGFPRNDIDVYQVRLARQTIICLQ 71


>AE014297-1726|AAF54971.1|  220|Drosophila melanogaster CG9588-PA
           protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 375 LIGVKGFPSLTITVYKILLARMTFHCMR 292
           L+  +GFP   I VY++ LAR T  C++
Sbjct: 44  LVDAEGFPRNDIDVYQVRLARQTIICLQ 71


>AY060768-1|AAL28316.1|  158|Drosophila melanogaster GH23035p
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 234 HDVSCDLSTQSLECSCFRETACNGKSSV 317
           HDV  D  T +  C CF +  CNG S +
Sbjct: 113 HDVRRDYYTDTTFCFCFLDHRCNGASGL 140


>AE014296-2015|AAF50021.1|  158|Drosophila melanogaster CG6038-PA
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 234 HDVSCDLSTQSLECSCFRETACNGKSSV 317
           HDV  D  T +  C CF +  CNG S +
Sbjct: 113 HDVRRDYYTDTTFCFCFLDHRCNGASGL 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,781,694
Number of Sequences: 53049
Number of extensions: 352381
Number of successful extensions: 701
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)