Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6a09
(306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical p... 30 0.37
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 30 0.37
AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical... 30 0.37
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 0.48
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 0.48
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 27 2.0
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 3.4
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 26 4.5
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 26 4.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 26 4.5
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 26 6.0
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 26 6.0
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 26 6.0
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 26 6.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 6.0
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 26 6.0
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 26 6.0
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 26 6.0
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 26 6.0
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 26 6.0
Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical pr... 25 7.9
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 25 7.9
>Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVPPTXRXY-PVNPCIXIYSC 205
+C P+ PDC + P++ C + T Y V+ CI ++C
Sbjct: 292 FCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCIAAFTC 337
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.9 bits (64), Expect = 0.37
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 74 CPPVCSPPDCRPICGPASPLLCQSSVPPTXRXYPVNPCIXIYSCYTQ 214
C P C P C+P C PL Q+ VP + P + SC Q
Sbjct: 372 CVPSCMPA-CQPSCTNPVPLTTQAPVPVVNQCIPPCQPQCLQSCLEQ 417
>AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVPPTXRXY-PVNPCIXIYSC 205
+C P+ PDC + P++ C + T Y V+ CI ++C
Sbjct: 292 FCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCIAAFTC 337
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 0.48
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 86 CSPPDCRPICGPASPLLCQSSVPPTXRXYPVNPC 187
C PP+ +P C C +SVPP R P PC
Sbjct: 200 CCPPE-QPCCPELKLDNCLASVPPCLRACPSCPC 232
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 77 PPVCSPPDCRPICGPASPLLCQSSVPPTXRXYPVNPCIXIYSC 205
P C+ P+CRP+ P +C + P + + C I SC
Sbjct: 1255 PVKCTTPECRPV-AKCIPNMCGTGEPLALENHLLATCSPISSC 1296
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 80 PVCSPPDCRPICGPASPLLCQSSVP 154
P C PP P C P++P++ P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPP 145
Score = 27.5 bits (58), Expect = 2.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 PVCSPPDCRPICGPASPLLCQSSVP 154
P C PP P C P +P++ P
Sbjct: 93 PACPPPCFGPACAPPAPIIVNGPPP 117
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 PVCSPPDCRPICGPASPLLCQSSVP 154
P C PP P C P +P++ P
Sbjct: 65 PACPPPCFGPACVPLAPIIVNGPPP 89
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVPPTXRXYP 175
+CPP PP C P P P +C PP P
Sbjct: 55 FCPP---PPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 77 PPVCSPPDC--RPICGPASPLLCQSSVPPTXRXYP-VNPC 187
PP+C P C P+C P P PP P +PC
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPC 87
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVPPTXRXYP 175
Y P +P C+P C PA C P + P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVP 153
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVPPTXRXYP 175
Y P +P C+P C PA C P + P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAPVQCVP 153
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 26.2 bits (55), Expect = 4.5
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 105 VRSVDLHLRSFARAACHQH 161
+ +D+H+ +RA CH H
Sbjct: 483 INHIDMHMAHVSRAVCHSH 501
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 74 CPPVCSPPDCRPICGPASPLLCQSS 148
C P C P + C PA +C SS
Sbjct: 178 CMPACLPSCVQSSCAPACQPMCSSS 202
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 74 CPPVCSPPDCRPICGPASPLLCQSSVPPTXRXYPVNPCI 190
CP PP PIC P P PP P PC+
Sbjct: 60 CPAQFCPPP--PICPPPPPPPMPCPPPPPPMPRPSCPCM 96
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 86 CSPPDCRPICGPASPLLCQSSVP 154
C PP P+C P P C +P
Sbjct: 241 CLPPPPSPVCMPPPPPPCPMPIP 263
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 74 CPPVCSPPDCRPICGPASP 130
C P C C+P C PA+P
Sbjct: 317 CAPQCDA-QCQPACSPAAP 334
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 65 MGYCPPVCSPPDCRPICGPASPLL 136
MGY PP+ P P+ P +P++
Sbjct: 23 MGYAPPIAPIPMVAPMPVPVAPMM 46
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +2
Query: 74 CPPVCSPPDCRPICGPASPLLC----QSSVP 154
CP +CS +C P C P C Q SVP
Sbjct: 224 CPSICSQANCIPQCMPRCLPTCIQQIQISVP 254
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 77 PPVCSPPDCRPICGPASPLLCQSSVPPTXRXYPVNP 184
PP SPP RP P SP PP+ P NP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPE--PRNP 183
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 89 SPPDCRPICGPASPLLCQSSVPPTXRXYP 175
+P C+P C PA C + P T + P
Sbjct: 124 APVQCQPSCMPACEQSCVAPAPVTVQCVP 152
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 89 SPPDCRPICGPASPLLCQSSVPPTXRXYP 175
+P C+P C PA C + P T + P
Sbjct: 125 APVQCQPSCMPACEQSCVAPAPVTVQCVP 153
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVP 154
Y P +P C+P C PA C + P
Sbjct: 119 YTPVAPAPVQCQPSCMPACEQSCVAPAP 146
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVP 154
Y P +P C+P C PA C + P
Sbjct: 119 YTPVAPAPVQCQPSCMPACEQSCVAPAP 146
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = +2
Query: 74 CP---PVCSPPDCRPICGPASPLLCQSSVPPTXRXYPV--NPCIXI 196
CP PVC+ P C P P P + P YP PCI +
Sbjct: 29 CPEPMPVCATPPCPPQYAPLPPPPMPAPA-PAYNPYPCANPPCIVV 73
>Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical
protein F49C5.9 protein.
Length = 376
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 118 TCISAPLPEQRATNTTXLSCKSLHXHIQLLHSNY 219
TC S P P R+ N+T S S+ HI H NY
Sbjct: 339 TCTS-PSPHPRSANSTSSSSMSVIEHIMRRH-NY 370
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 77 PPVCSPPDCRPICGPASP 130
PP C+PP P CG +P
Sbjct: 37 PPACAPPPA-PACGGGAP 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,149,629
Number of Sequences: 27780
Number of extensions: 87980
Number of successful extensions: 411
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -