Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a07
         (685 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1486 - 37709159-37709377,37709558-37709821,37709903-377099...    33   0.21 
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409...    32   0.49 
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203...    30   2.0  
07_01_0284 - 2082249-2082256,2082496-2083009                           29   2.6  
02_05_1225 + 35060642-35060815,35061254-35061802,35062284-350623...    29   3.4  
07_03_0464 + 18456502-18456697,18457281-18457368,18457448-184575...    28   7.9  
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14...    28   7.9  

>01_06_1486 -
           37709159-37709377,37709558-37709821,37709903-37709995,
           37710387-37710581,37710665-37710763,37710884-37711132,
           37711264-37711467,37711543-37711602,37711731-37711913,
           37712382-37712999,37713101-37713169,37713275-37713853
          Length = 943

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +1

Query: 448 SDKKSAVKKKAIVRLTAIKQGSDSEQILELSDVE-ERIITLMGGE 579
           +D+  A   + ++ LT +K+G     ++E+SD++ E ++ L+GGE
Sbjct: 501 ADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLVGGE 545


>03_06_0642 +
           35239658-35240083,35240167-35240238,35240305-35240919,
           35241253-35241435,35241604-35241663,35241733-35241936,
           35242497-35242745,35243609-35243707,35243760-35243858,
           35244463-35244480,35244668-35244862,35244981-35245073,
           35245265-35245531,35245884-35246102
          Length = 932

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +1

Query: 448 SDKKSAVKKKAIVRLTAIKQGSDSEQILELSDVE-ERIITLMGGE 579
           +D+  A   + ++ LT +K+G     ++ELSD++ E ++ L+GG+
Sbjct: 450 ADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGD 494


>07_01_0276 +
           2028983-2029070,2030084-2030151,2030317-2031246,
           2031334-2031415,2031544-2031609,2032606-2033304,
           2033422-2035424,2035599-2036173,2037060-2037223,
           2037306-2037365,2037475-2037839
          Length = 1699

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 541 DVEERIITLMGGEKFVVPETPKHAAINDSYKDPPGRV 651
           D E ++  + G + F  P  P   +++  YKDP G+V
Sbjct: 480 DQESKVAVITGVDGFATPTYPNPESLSLYYKDPQGQV 516


>07_01_0284 - 2082249-2082256,2082496-2083009
          Length = 173

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 571 GGEKFVVPETPKHAAINDSYKDPPGRVPDED 663
           GG  FV   TP HAA+  + K+P  + P+ED
Sbjct: 143 GGYAFVQLRTPSHAALALADKNPGRQWPEED 173


>02_05_1225 +
           35060642-35060815,35061254-35061802,35062284-35062348,
           35062417-35062957,35063321-35064610
          Length = 872

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 11  SLKQDDVYKQSMLIIKINLPLTKTNAP-KLRIQVISKRSKQRSYTPEM 151
           S KQ DV+     +IK   P    NAP K R ++ S+ S  +   PE+
Sbjct: 61  STKQQDVFDSREQVIKEESPKQSANAPGKERAELKSRESLSQKEQPEI 108


>07_03_0464 +
           18456502-18456697,18457281-18457368,18457448-18457524,
           18457844-18457883,18458109-18458175,18458908-18458993,
           18459380-18459461,18459778-18459834,18460135-18460173,
           18460402-18460472,18460912-18461047,18461048-18461092
          Length = 327

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +1

Query: 436 AKYWSDKKSAVKKKAIVRLTAIKQGSDSEQILELSDVEERIITLMGGEKFVVPETPKHAA 615
           AK     KSA+  K + RL  + QGS     + LS+      TL+      +P   KH+ 
Sbjct: 117 AKMHDGSKSALPPKGVERLIFVLQGS-----ILLSEESGNTHTLLVDSYAYLPANMKHSV 171

Query: 616 IND 624
           I+D
Sbjct: 172 ISD 174


>01_01_0020 +
           147147-147313,148450-148548,148634-148742,148856-148927,
           149056-149061,150811-150915,151048-151539,151629-152025,
           152178-153646,154010-154450,154543-155214
          Length = 1342

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 424 GKQWAKYWSDKKSAVKKKAIVRLTAIKQGSDSEQILELSDVEERIITLMGG 576
           GK+W K  S K+S++    +          D +Q+ E SD E   +TL GG
Sbjct: 467 GKKWRKANSIKESSLDDNDVGEAAVSVSDDDEDQVTEGSD-ELTDVTLEGG 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,775,374
Number of Sequences: 37544
Number of extensions: 393733
Number of successful extensions: 915
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)