Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6a07
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical... 34 0.082
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 31 1.0
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 31 1.0
AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical... 30 1.8
Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL032632-3|CAA21583.1| 199|Caenorhabditis elegans Hypothetical ... 28 5.4
Z82269-8|CAJ76946.1| 185|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL021487-16|CAJ76947.1| 185|Caenorhabditis elegans Hypothetical... 28 7.1
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical
protein Y41D4B.27 protein.
Length = 365
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 491 KRTIAFFLTALFLSDQYFAHCFPVFVAPPI 402
K TIA FL +L + +HCFP F A P+
Sbjct: 145 KETIACFLKEFYLVGDWLSHCFPEFAAFPV 174
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 223 SGEMYQMERSRSMHPSPDQVYTLLEVMEINPLLAKGHVKSVMARQTATRHWHHLAIKLNN 402
SG + +RSR++H DQVY + + NP + + S A TA R +
Sbjct: 430 SGNWMEGQRSRNIHNKNDQVYDYQQ--QKNPFGSAAYKSSPYASHTARRSKTPIR-NAEA 486
Query: 403 MGGATKTGKQW 435
GG +QW
Sbjct: 487 EGGVESIARQW 497
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 223 SGEMYQMERSRSMHPSPDQVYTLLEVMEINPLLAKGHVKSVMARQTATRHWHHLAIKLNN 402
SG + +RSR++H DQVY + + NP + + S A TA R +
Sbjct: 445 SGNWMEGQRSRNIHNKNDQVYDYQQ--QKNPFGSAAYKSSPYASHTARRSKTPIR-NAEA 501
Query: 403 MGGATKTGKQW 435
GG +QW
Sbjct: 502 EGGVESIARQW 512
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 223 SGEMYQMERSRSMHPSPDQVYTLLEVMEINPLLAKGHVKSVMARQTATRHWHHLAIKLNN 402
SG + +RSR++H DQVY + + NP + + S A TA R +
Sbjct: 430 SGNWMEGQRSRNIHNKNDQVYDYQQ--QKNPFGSAAYKSSPYASHTARRSKTPIR-NAEA 486
Query: 403 MGGATKTGKQW 435
GG +QW
Sbjct: 487 EGGVESIARQW 497
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 223 SGEMYQMERSRSMHPSPDQVYTLLEVMEINPLLAKGHVKSVMARQTATRHWHHLAIKLNN 402
SG + +RSR++H DQVY + + NP + + S A TA R +
Sbjct: 445 SGNWMEGQRSRNIHNKNDQVYDYQQ--QKNPFGSAAYKSSPYASHTARRSKTPIR-NAEA 501
Query: 403 MGGATKTGKQW 435
GG +QW
Sbjct: 502 EGGVESIARQW 512
>AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical
protein F59E11.7a protein.
Length = 195
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 200 YNVYLVSNQEKCIKWNGVVRCIPHRI 277
+N + +++EKC+KWN + CI +I
Sbjct: 139 FNDFHGTSKEKCLKWNDIQECIKTQI 164
>Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical
protein C11E4.3 protein.
Length = 411
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 591 YYKLLTAHQSYDSFFHIGQFQYLFAVRSLFY 499
YYK+ + S D FF I Q +Y + LFY
Sbjct: 164 YYKIWSEGYSVDGFFEIIQQKYGYKCEDLFY 194
>AL032632-3|CAA21583.1| 199|Caenorhabditis elegans Hypothetical
protein Y11D7A.7 protein.
Length = 199
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 225 RRNVSNGTESFDASLTGSSVHSFRSHGDKSAFSEGPR*VGNGQTDGHQALASFSYQTKQY 404
RR+++N + S D S SS+ + RS+ + +F T GH ASF +T++
Sbjct: 127 RRDLANSS-SRDGS--SSSIANSRSNDNHESFKSSKN---KSTTLGH---ASFLLKTQKL 177
Query: 405 GWSHEDREAVGKV 443
HE RE GK+
Sbjct: 178 SSFHEQREFQGKI 190
>Z82269-8|CAJ76946.1| 185|Caenorhabditis elegans Hypothetical
protein Y45F10B.13c protein.
Length = 185
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +1
Query: 244 ERSRSMHPSPDQVYTLLEVMEINPLLAKGHVKSVMARQTATRHWHHLAIKLNNMGGATKT 423
+RSR++H DQVY + + NP + + S A TA R + GG
Sbjct: 4 QRSRNIHNKNDQVYDYQQ--QKNPFGSAAYKSSPYASHTARRSKTPIR-NAEAEGGVESI 60
Query: 424 GKQW 435
+QW
Sbjct: 61 ARQW 64
>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
protein T01E8.3 protein.
Length = 1299
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 666 AVLVRDTSRRVLVAVVDCRVFGSFWYYKL 580
A L+R +S V V+ +V G FW+Y+L
Sbjct: 686 AFLIRTSSTDSSVYVLSLKVDGEFWHYRL 714
>AL021487-16|CAJ76947.1| 185|Caenorhabditis elegans Hypothetical
protein Y45F10B.13c protein.
Length = 185
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +1
Query: 244 ERSRSMHPSPDQVYTLLEVMEINPLLAKGHVKSVMARQTATRHWHHLAIKLNNMGGATKT 423
+RSR++H DQVY + + NP + + S A TA R + GG
Sbjct: 4 QRSRNIHNKNDQVYDYQQ--QKNPFGSAAYKSSPYASHTARRSKTPIR-NAEAEGGVESI 60
Query: 424 GKQW 435
+QW
Sbjct: 61 ARQW 64
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 448 SDKKSAVKKKAIVRLTAI-KQGSDSEQILELSDV----EERIITLMGGEKFVVPETPKHA 612
+ +K +K+++ R +I K+ +DSEQ +L E + E+ V+PE PK A
Sbjct: 700 AQEKELARKESLARAGSIMKESNDSEQNSKLDTKSITDETTVKDSPSTEETVIPEKPKPA 759
Query: 613 AINDSYKDPPGRVPDEDRDTQQAN 684
++ + + + ++QAN
Sbjct: 760 FDRENIAARRKKRQELQKQSEQAN 783
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,125,267
Number of Sequences: 27780
Number of extensions: 342781
Number of successful extensions: 937
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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