Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6a01
         (725 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NDK5 Cluster: ENSANGP00000030497; n=1; Anopheles gamb...    83   5e-15
UniRef50_Q7KRW1 Cluster: Protein TRC8 homolog; n=10; Endopterygo...    57   4e-07

>UniRef50_A0NDK5 Cluster: ENSANGP00000030497; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030497 - Anopheles gambiae
           str. PEST
          Length = 129

 Score = 83.4 bits (197), Expect = 5e-15
 Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
 Frame = +3

Query: 270 LRLKALALVEVLLRVPPLFVVDEFLKISLGLPVSSEE-VPVLSN-VTVDHVDIL----EP 431
           +R K L LV+V++RVP LF++DE LKI +G+P+      P  S+ + +D   +     + 
Sbjct: 4   VRTKVLGLVDVIMRVPSLFIIDEILKIGMGVPIGQPAGQPANSSAINLDSPPVAAMLPDD 63

Query: 432 DVNYYDA-NFYNAFFVTFFKFXXXXXXXXXXXXIFVLYAKHLIIVYLYLTSLGIVFVSYW 608
           D    D+   Y    +   KF            +F+L+ +HL+IVY+Y+ S+G++F+SYW
Sbjct: 64  DRGMQDSIEVYKFVSLAVLKFLICLFGAISAACVFMLWTRHLVIVYMYMVSVGLIFLSYW 123

Query: 609 TNVS 620
           +NVS
Sbjct: 124 SNVS 127


>UniRef50_Q7KRW1 Cluster: Protein TRC8 homolog; n=10;
           Endopterygota|Rep: Protein TRC8 homolog - Drosophila
           melanogaster (Fruit fly)
          Length = 809

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 31/93 (33%), Positives = 47/93 (50%)
 Frame = +3

Query: 447 DANFYNAFFVTFFKFXXXXXXXXXXXXIFVLYAKHLIIVYLYLTSLGIVFVSYWTNVSXX 626
           D    +    T  KF            IF+L+ +HL++VY++LTSLG+ F+SYW+NVS  
Sbjct: 113 DQTLADVLSTTTVKFVLCVFAFLSAACIFMLWTRHLVMVYMFLTSLGLTFLSYWSNVS-- 170

Query: 627 XXXXXXXXXXTSPHHSSSILEDILNLNLKNLFD 725
                          S S++ED+++LN   L D
Sbjct: 171 --------ALALTERSPSMVEDLMSLNTTRLLD 195



 Score = 45.6 bits (103), Expect = 0.001
 Identities = 18/33 (54%), Positives = 27/33 (81%)
 Frame = +3

Query: 264 MSLRLKALALVEVLLRVPPLFVVDEFLKISLGL 362
           MS+R K L LV+V++RVPP+ V+DE LK+ +G+
Sbjct: 1   MSVRTKVLGLVDVMMRVPPVMVIDEILKMDMGM 33


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,698,328
Number of Sequences: 1657284
Number of extensions: 13065507
Number of successful extensions: 40175
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 37063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40112
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)