Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5p22
         (714 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014603-1|AAH14603.1|  233|Homo sapiens GLI pathogenesis-relate...    37   0.062
AY358731-1|AAQ89093.1|  242|Homo sapiens ALKN2972 protein.             37   0.062
AK124274-1|BAC85824.1|  128|Homo sapiens protein ( Homo sapiens ...    31   3.1  

>BC014603-1|AAH14603.1|  233|Homo sapiens GLI pathogenesis-related 1
           like 1 protein.
          Length = 233

 Score = 37.1 bits (82), Expect = 0.062
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +2

Query: 452 WDRELAFLAQRLSDQCQFVHDDCRATVRYPYAG-QSVGEVRWRKSRDTDGLIAQRAVRRV 628
           WD+ LA +A+  ++QC+F H+DC       YA  + VGE  W       G I     R  
Sbjct: 60  WDKGLAKMAKAWANQCKFEHNDCLDKSYKCYAAFEYVGENIWL------GGIKSFTPRHA 113

Query: 629 LEAWWGE 649
           + AW+ E
Sbjct: 114 ITAWYNE 120


>AY358731-1|AAQ89093.1|  242|Homo sapiens ALKN2972 protein.
          Length = 242

 Score = 37.1 bits (82), Expect = 0.062
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +2

Query: 452 WDRELAFLAQRLSDQCQFVHDDCRATVRYPYAG-QSVGEVRWRKSRDTDGLIAQRAVRRV 628
           WD+ LA +A+  ++QC+F H+DC       YA  + VGE  W       G I     R  
Sbjct: 60  WDKGLAKMAKAWANQCKFEHNDCLDKSYKCYAAFEYVGENIWL------GGIKSFTPRHA 113

Query: 629 LEAWWGE 649
           + AW+ E
Sbjct: 114 ITAWYNE 120


>AK124274-1|BAC85824.1|  128|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42280 fis, clone TLIVE2003197. ).
          Length = 128

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -3

Query: 709 STS*RQXKWRCQLFRSHSPLFPPPRL*NPSDCS 611
           STS R+ KW   L  S +PL PPP L +  DCS
Sbjct: 77  STS-RKKKWAGSLTLSTAPLSPPPSLVHCEDCS 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,716,296
Number of Sequences: 237096
Number of extensions: 2339529
Number of successful extensions: 8906
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8856
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)