Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5p14
(658 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 31 0.61
02_04_0469 - 23178589-23178755,23179529-23179697,23179836-231799... 29 2.5
02_01_0076 + 540182-540583,541266-541475,541557-542018,542112-54... 29 2.5
02_03_0161 + 15828887-15828985,15829066-15829686,15829759-158299... 29 3.3
01_05_0686 - 24277812-24277909,24278029-24278081,24278227-242783... 29 3.3
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 29 4.3
08_01_1011 + 10226160-10226676,10226794-10226810,10227677-102278... 29 4.3
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 28 5.7
01_05_0482 + 22614097-22614729,22614859-22615182,22615291-226153... 28 5.7
06_03_1186 - 28260487-28262112,28262205-28262345,28262429-282625... 28 7.5
04_04_0923 + 29441740-29441980,29442321-29442401,29442630-294427... 28 7.5
06_03_1248 + 28685911-28687719 27 9.9
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213... 27 9.9
04_01_0041 - 464695-464850,467485-469029 27 9.9
02_02_0652 - 12651163-12653210,12653327-12653627 27 9.9
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/53 (24%), Positives = 35/53 (66%)
Frame = +1
Query: 376 HTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPKSAPNSRPQT 534
H ESF ++++ +++EE++ +++Q+ ++D+ + + E +P+S + P+T
Sbjct: 254 HKESFPEDKVIAEHADEEVKAEDQQSK-QADDMDAEVLQEEIPESKESDLPET 305
>02_04_0469 -
23178589-23178755,23179529-23179697,23179836-23179919,
23180495-23180647,23180798-23180950,23182488-23182589
Length = 275
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +1
Query: 304 VQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENS 483
+QNE I+ +Q +D + Q + + + ++ EE + + E LE+ S
Sbjct: 112 IQNEINIDDVQKLMDDTAEAKAYQDEINAALGEQLSAEDEEAVMAEFEN--LEAQLAVES 169
Query: 484 LDCEPVPKSAPNSRPQTP 537
L PV + P + +TP
Sbjct: 170 LPDAPVTEVRPEEKSETP 187
>02_01_0076 +
540182-540583,541266-541475,541557-542018,542112-542222,
542309-542488,543083-543367,544581-544701,544802-544923
Length = 630
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -3
Query: 476 SLLSDSRAVCSFFNSISSSE---FTVTICSITNDSVCCGIDSVVDRSNSGCIGSM 321
S +S S++ CS +S+ SSE + V++ DS C D +VD + +G +
Sbjct: 436 SCVSSSQSYCSDIHSLDSSELQAYCVSVVEKIKDSFGCTGDLMVDANIGAWVGEL 490
>02_03_0161 +
15828887-15828985,15829066-15829686,15829759-15829908,
15829994-15830389,15830455-15830487,15830553-15830693,
15830793-15830924,15830999-15831082,15831159-15831461,
15831543-15831734,15831805-15831942,15832019-15832143,
15832223-15832319
Length = 836
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 289 ISDMKVQNECYIEP-IQPELDRSTTESMPQHTESFVIEQM 405
+ D +V+NE EP +QP D TTE++ + +++ M
Sbjct: 1 MEDDEVRNEAQFEPSVQPRFDEITTEALVTEHKPVIMKDM 40
>01_05_0686 -
24277812-24277909,24278029-24278081,24278227-24278309,
24278353-24278401,24278466-24278514,24279455-24280418
Length = 431
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 99 NKIKRSTDPASSDSGVSCTRRPECYESKSIVDPKTITKSCSSVAGAFEDWKSYYGA 266
++ ++++ +S DSG S PEC E + + I SC G W Y A
Sbjct: 94 DQYRKASKESSKDSGASAAAAPECSECQ-----QPIKLSCPLCRGPVSHWTKDYDA 144
>08_02_0823 +
21557111-21557292,21557391-21557473,21557722-21557810,
21557985-21558058,21558264-21558314,21558406-21558482,
21560206-21560900
Length = 416
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +1
Query: 391 VIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPKSAPNSRPQTPK 540
+IEQ + + T S + +SL P+P P +P PK
Sbjct: 307 IIEQAAAAAASSSGSSSSSSTDSPSSSSSSSLSPSPLPSPPPQQQPTVPK 356
>08_01_1011 +
10226160-10226676,10226794-10226810,10227677-10227886,
10227921-10228406
Length = 409
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = +3
Query: 165 ECYESK--SIVDPKT-----ITKSCSSVAGAFEDWKSYYGACY 272
EC ++ S VD KT I+++ +V AF WK Y+G CY
Sbjct: 365 ECQKASLPSCVDIKTDNRLLISQTHPAVDAAFVLWKKYFGTCY 407
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 346 DRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPKSAPNSR 525
D S ++ +H ES E + +E+ E ESD+++ E + KS R
Sbjct: 190 DYSESDEEDEHDESEDEESDIEDEGDEDWTSNGEAKTDESDDEDALKSVEELKKSVDRLR 249
Query: 526 PQTPKTLQ 549
P TL+
Sbjct: 250 KLVPCTLE 257
>01_05_0482 +
22614097-22614729,22614859-22615182,22615291-22615396,
22615628-22615668
Length = 367
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 117 TDPASSDSGVSCTRRPECYESKSIVDPKTITKSCSSVAGA 236
T A D V+ R E E+ ++ P ++T CSSVA A
Sbjct: 57 TASAVEDDAVAPGRGEEGGEASAVGSPCSVTSDCSSVASA 96
>06_03_1186 -
28260487-28262112,28262205-28262345,28262429-28262573,
28262964-28263067,28263324-28263456,28263904-28264013,
28265144-28265167
Length = 760
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 HKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVN-SEEEMELKNEQ 450
HK + + +K Q + + P+ +DR + QH + + V S+ EM+ +N Q
Sbjct: 258 HKNKLEASLKQQKD--VHPVADGIDRLRENTRRQHADKSDGKGHVEKPVSDSEMKRRNIQ 315
Query: 451 TALESDNKENSLDCE 495
++ NK++ CE
Sbjct: 316 KEVQKANKKDVRPCE 330
>04_04_0923 +
29441740-29441980,29442321-29442401,29442630-29442719,
29443123-29443203,29443721-29443774,29444062-29444111,
29444542-29444623,29444734-29444838,29445514-29445641,
29445726-29445797,29445887-29445937,29446029-29446100,
29446201-29446278,29446446-29447270,29447648-29448556
Length = 972
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 379 TESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 531
T+S IEQ++ +S +EME NEQ +K+ S D VP +A R +
Sbjct: 107 TDSSSIEQVIGTSSIQEME-TNEQV----KSKDTSKDMTQVPANAEGIRKE 152
>06_03_1248 + 28685911-28687719
Length = 602
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 352 STTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENS 483
S T++ P ES +E+M + E + E+T + ENS
Sbjct: 374 SATQNEPDEPESTTVEEMAVEEEIKTDESQQEETPKPEERMENS 417
>05_07_0076 -
27520152-27520379,27520785-27521096,27521194-27521333,
27521893-27521956,27522071-27522277,27522350-27522493,
27522578-27522709,27522880-27524294,27524647-27524920,
27526096-27526129,27527028-27527059
Length = 993
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 343 LDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDC 492
LDR +S+ E + +V + +E+M L++ ++ALE E++ DC
Sbjct: 594 LDRILDDSLESMIEEHTTDDLVDMAEQEKMHLEDTKSALE----ESAGDC 639
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 328 PIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPV 501
PIQ E+ ++ E + H + I+ +VTV S + ++ Q E +E L CE V
Sbjct: 130 PIQAEV-KAKVEKLNLHGQKLEIQIIVTVYSVPKATIEGLQLLGERMLQEEKLKCEVV 186
>02_02_0652 - 12651163-12653210,12653327-12653627
Length = 782
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 328 PIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPK 507
PIQ E+ ++ E + H + I+ +VTV S + ++ Q E E L CE V
Sbjct: 382 PIQAEV-KAKVEKLNLHGQKLKIQIIVTVYSVPKATIEGLQLLGERMLLEEQLKCEVVKS 440
Query: 508 S 510
S
Sbjct: 441 S 441
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.130 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,552,118
Number of Sequences: 37544
Number of extensions: 330534
Number of successful extensions: 1014
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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