Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5p10
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine r... 31 0.83
U80445-6|AAB37797.2| 575|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine re... 30 1.5
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 2.5
U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine rece... 29 2.5
Z73103-2|CAA97425.2| 400|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 4.4
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41263-9|AAC24424.1| 179|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical ... 28 5.9
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical p... 28 7.8
Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical p... 28 7.8
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine
receptor, class t protein23 protein.
Length = 356
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 473 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 574
C F A Y+Y+Y+ F S A+ +AWQ A
Sbjct: 257 CSFNAIAAYIYVYMQFFYSPPAVVLVGQLAWQCA 290
>U80445-6|AAB37797.2| 575|Caenorhabditis elegans Hypothetical
protein C50F2.1 protein.
Length = 575
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 558 MEIGGFKALLDAV---NDRYIYKYIQKAVKGQLSLLILYEKQFV 436
+E+GGFK L DA+ ND +++ I ++ +S + L QF+
Sbjct: 389 IELGGFKILFDAINSFNDEFVHLNILDTIRAVISYVSLKTCQFL 432
>AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical
protein Y55F3C.10 protein.
Length = 351
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 473 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 574
C F A Y+Y+Y+ F S A+ +AWQ A
Sbjct: 253 CSFNAIAAYIYVYMQFFYSPPAVVLIGQLAWQCA 286
>AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine
receptor, class t protein24 protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 473 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 574
C F A Y+Y+Y+ F ++S + I WQ++
Sbjct: 263 CSFNAIAAYIYVYMQFFSASPLVILVGQIGWQWS 296
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 398 ANSRDANKYN*NETNCFSYKINSDNCPFTAFC 493
+NS + N +N N SY N+DNC F C
Sbjct: 565 SNSNNNNNFNGNGNGDGSYNNNNDNCDFENRC 596
>U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein14 protein.
Length = 337
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 473 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 574
C F A Y+Y+Y+ F S L IAWQ++
Sbjct: 229 CSFHAIAAYIYVYMQFFPSPPWLIIIGQIAWQWS 262
>Z73103-2|CAA97425.2| 400|Caenorhabditis elegans Hypothetical
protein C08F8.3 protein.
Length = 400
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 274 DALDRVTELLVVKMIQLRDKQLPGELEYLQKELEKVKRKLKGEQS 408
DA+ +T+ V ++ KQ+ +E L+K+ E+ +R+ K QS
Sbjct: 203 DAMWELTKTSSVAATDVQKKQMKEAIEQLRKDAEQFEREFKDSQS 247
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 307 VKMIQLRDKQLPGELEYLQKELEKVKRKLK 396
V M + R +QL GE+E+ ++E E +KR+++
Sbjct: 915 VMMTKERVEQLEGEIEWKEEECEGLKRRIR 944
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +1
Query: 241 LVSNPVVTKVEDALDRVTELLVVKMIQLRDKQLPGELEYLQKELEKVKRKLKGEQ 405
LV NP+VT++ D ++ E K + +D++ + E ++E ++ K++ K E+
Sbjct: 214 LVENPIVTEMSDRDEKKEEKKDDKKDEKKDEKKEAKKEEKKEEKKEEKKEEKKEE 268
>U41263-9|AAC24424.1| 179|Caenorhabditis elegans Hypothetical
protein T19D12.3 protein.
Length = 179
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 218 IVVFVIYHNLDTTGRTVCIETKAKSRAFRV 129
IV+ V YH+ D GRT T +SR ++V
Sbjct: 105 IVIVVGYHSDDDNGRTYTTLTHLRSRGYKV 134
>AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical
protein E03D2.4 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 473 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 574
C F A Y+Y+Y+ F S L +AWQ++
Sbjct: 250 CTFHAIAAYIYVYMQFFHSPPWLIIIGQLAWQWS 283
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 624 WDKTWKESFPRRSIVLLGAWKRS*GIW 704
WD W S P S +LLG WK G W
Sbjct: 1152 WDVDW--SRPDDSALLLGVWKYGYGSW 1176
>Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical
protein C35C5.10b protein.
Length = 318
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = -1
Query: 668 NYRPSWKRFLPS--FVPL 621
NY PSW+RFL S F+PL
Sbjct: 51 NYLPSWQRFLESIVFIPL 68
>Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical
protein C35C5.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = -1
Query: 668 NYRPSWKRFLPS--FVPL 621
NY PSW+RFL S F+PL
Sbjct: 27 NYLPSWQRFLESIVFIPL 44
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical protein
C09G1.2 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 679 APNKTIDRLGNDSFQVLSHFSVKKIQSHWWCHFGFRVLPCNGNRRF 542
+P KT+ R D +HF+VKK + FGF LP R F
Sbjct: 905 SPEKTLVRAEKD----FNHFTVKKKEECLSLSFGFIALPIKKRRPF 946
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,596,374
Number of Sequences: 27780
Number of extensions: 280820
Number of successful extensions: 753
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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