Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5p08
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 32 0.40
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 32 0.40
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 32 0.40
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 32 0.40
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 32 0.40
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 32 0.40
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 32 0.40
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 32 0.40
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 31 0.70
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 28 6.5
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.5
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 28 6.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 6.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.5
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 27 8.6
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 27 8.6
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 27 8.6
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 27 8.6
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 27 8.6
AC024200-7|AAF36006.1| 332|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 34 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 90
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 91 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 117
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 34 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 90
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 91 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 117
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 71 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 127
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 128 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 154
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 71 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 127
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 128 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 154
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 34 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 90
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 91 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 117
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 34 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 90
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 91 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 117
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 71 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 127
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 128 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 154
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +2
Query: 314 LSNGVGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANS 493
L +G A T +P + H M + S ++H L L+ + F EL + + S
Sbjct: 71 LYTNMGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTS 127
Query: 494 NSDGTFSGSNCNTATRPVDLNEKNEHLE 577
DG+ S C++A+ DLNE H +
Sbjct: 128 R-DGSTSSDVCSSASFKDDLNEFVRHTQ 154
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +2
Query: 326 VGRASTPGSPTIRHRNDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANSNSDG 505
+G A T +P + H M + S ++H L L+ + F EL + + S DG
Sbjct: 1 MGGAPT-STPMMHHEMGEAMKRDKESIYAHPL--YPLLVLLFEKCELATSTPRDTSR-DG 56
Query: 506 TFSGSNCNTATRPVDLNEKNEHLE 577
+ S C++A+ DLNE H +
Sbjct: 57 STSSDVCSSASFKDDLNEFVRHTQ 80
>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
protein C01G10.1 protein.
Length = 1204
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 419 LDNISLMSMNFSHYE-LMRNLSQANSNSDGTFSGSNCNT 532
LD IS MS+NF++YE +++N S S FS ++ T
Sbjct: 373 LDVISKMSLNFANYESIIQNASNKLSECFSNFSVTSLET 411
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 422 DNISLMSMNFSHYEL-MRNLSQANSNSDGTFSGSNCNTATRPVDLNEKNEHLERYFRSAE 598
DNI+L+ ++ + + L +S S + N V L+ + + ERYFR +
Sbjct: 432 DNIALLRVDIRDNPIALAGLLALHSAMKMNTSITLLNIDASCVKLSSEKDEFERYFREIQ 491
Query: 599 IWSDRN 616
+ DRN
Sbjct: 492 TYCDRN 497
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 422 DNISLMSMNFSHYEL-MRNLSQANSNSDGTFSGSNCNTATRPVDLNEKNEHLERYFRSAE 598
DNI+L+ ++ + + L +S S + N V L+ + + ERYFR +
Sbjct: 432 DNIALLRVDIRDNPIALAGLLALHSAMKMNTSITLLNIDASCVKLSSEKDEFERYFREIQ 491
Query: 599 IWSDRN 616
+ DRN
Sbjct: 492 TYCDRN 497
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 388 LESRFHIQPRIRQYIFNVNELLAL 459
+ S FH+ P+I Q+I N E LA+
Sbjct: 279 MNSHFHVDPKILQFISNTVEHLAI 302
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 388 LESRFHIQPRIRQYIFNVNELLAL 459
+ S FH+ P+I Q+I N E LA+
Sbjct: 279 MNSHFHVDPKILQFISNTVEHLAI 302
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 388 LESRFHIQPRIRQYIFNVNELLAL 459
+ S FH+ P+I Q+I N E LA+
Sbjct: 177 MNSHFHVDPKILQFISNTVEHLAI 200
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 388 LESRFHIQPRIRQYIFNVNELLAL 459
+ S FH+ P+I Q+I N E LA+
Sbjct: 279 MNSHFHVDPKILQFISNTVEHLAI 302
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 LYEIDMENQTLNNEKRF-INKARSHNTGPSQFVRNEPVKRKSVLLNET 268
LY+ + + N E+ F +NK + + PS+ E V++K V + ET
Sbjct: 4548 LYQGNQSRELDNTERNFTVNKEKDESKKPSEVQPAEIVEQKDVPVQET 4595
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 LYEIDMENQTLNNEKRF-INKARSHNTGPSQFVRNEPVKRKSVLLNET 268
LY+ + + N E+ F +NK + + PS+ E V++K V + ET
Sbjct: 4548 LYQGNQSRELDNTERNFTVNKEKDESKKPSEVQPAEIVEQKDVPVQET 4595
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 LYEIDMENQTLNNEKRF-INKARSHNTGPSQFVRNEPVKRKSVLLNET 268
LY+ + + N E+ F +NK + + PS+ E V++K V + ET
Sbjct: 4548 LYQGNQSRELDNTERNFTVNKEKDESKKPSEVQPAEIVEQKDVPVQET 4595
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1135 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1184
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1474 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1523
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 794 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 843
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1132 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1181
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1135 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1184
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1474 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1523
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1132 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1181
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1135 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1184
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1474 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1523
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 794 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 843
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1132 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1181
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 342 VLARPTPFDSLHFFSLP--NAKSKELMVSFSNTDLRFTG 232
VLA T FD+ H +P +K + VSF NT++ F G
Sbjct: 17 VLATSTDFDNAHVMGVPQVTCSAKLITVSF-NTNIPFQG 54
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 35 IRKCTKYCMKHASLLIAR*CATQLCYL--TIQYLYE-IDMENQTLNNEKR 175
+R+C K CM+ L+ CA Q L ++Q+ YE ID + + +++
Sbjct: 1135 VRECAKACMQQTYQLMFESCAEQFPILDTSVQFWYEFIDYIMRVIEEDQK 1184
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 342 VLARPTPFDSLHFFSLP--NAKSKELMVSFSNTDLRFTG 232
VLA T FD+ H +P +K + VSF NT++ F G
Sbjct: 17 VLATSTDFDNAHVMGVPQVTCSAKLITVSF-NTNIPFQG 54
>AC024200-7|AAF36006.1| 332|Caenorhabditis elegans Hypothetical
protein Y71F9AL.8 protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +2
Query: 215 QFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRASTPGSPTIR-HRNDIL--- 382
Q V + PV++ S + + + SL+L + +G+ +PG+ T R RND L
Sbjct: 106 QVVASRPVEKNSEIEVQKVASLELQAAPTAPTTSAAQLGKTKSPGARTQRIERNDELSRD 165
Query: 383 -MNSSRAST 406
SS AST
Sbjct: 166 VFESSCAST 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,483,401
Number of Sequences: 27780
Number of extensions: 293008
Number of successful extensions: 848
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -