Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5p03
         (543 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    47   3e-04
UniRef50_UPI0000DBFFDF Cluster: UPI0000DBFFDF related cluster; n...    32   7.4  
UniRef50_Q0AKA3 Cluster: Putative uncharacterized protein; n=2; ...    32   9.8  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -3

Query: 538 FLLLR*VDELTAHLVLSGYWSP 473
           FLLLR VDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_UPI0000DBFFDF Cluster: UPI0000DBFFDF related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFFDF UniRef100 entry -
           Rattus norvegicus
          Length = 423

 Score = 32.3 bits (70), Expect = 7.4
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 540 FFCCLDEWTSLQPTWC*VVTGAHRHLHLYFH 448
           F CC+  W+ +    C VVT AH H+H+Y H
Sbjct: 136 FVCCV--WSQVCGHRC-VVTDAHMHIHMYIH 163


>UniRef50_Q0AKA3 Cluster: Putative uncharacterized protein; n=2;
           Hyphomonadaceae|Rep: Putative uncharacterized protein -
           Maricaulis maris (strain MCS10)
          Length = 184

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +2

Query: 230 FKYISDFLGLIPILLLNVQSSLFRDSCLRNVFNTGFFVGGPFRSSEMAGKRKRVVPSLCY 409
           F+ I DF G  PIL+ ++ + L  +  LR +F+T    G PF   E AG  + +  ++  
Sbjct: 58  FQAIRDFGGAYPILIAHIIAFLVVNDRLRRIFST-LVAGDPF-VPENAGHLRMIAIAIAV 115

Query: 410 F 412
           F
Sbjct: 116 F 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,283,557
Number of Sequences: 1657284
Number of extensions: 8350963
Number of successful extensions: 12818
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12812
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)