Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5p02
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41272-4|AAA82448.2|  349|Caenorhabditis elegans Hypothetical pr...    72   5e-13
Z67995-3|CAI79213.1|  150|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine rec...    28   7.8  

>U41272-4|AAA82448.2|  349|Caenorhabditis elegans Hypothetical
           protein T03G11.3 protein.
          Length = 349

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 39/124 (31%), Positives = 60/124 (48%)
 Frame = +2

Query: 296 CGVCGRHFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPSTT 475
           C +C R F    + KH+  C+K  S  RKPFD  K R +G++       ++K     +  
Sbjct: 23  CPICDRRFIKSSLEKHESACRKLASLHRKPFDSGKQRASGSDLT--YADIKKVQHEKNKN 80

Query: 476 KVNKGKQLNSNWRQKHEEFIQAIRAAKQVQAHLNAGGKLSDLXXXXXSENPDYVQCPHCN 655
                 +  +NWR++H  FI A+ ++K+V   L  G  L        +   DYVQC +C+
Sbjct: 81  G-GVFPRPQTNWRERHGNFIDAVSSSKRVDYALKTGAPLP--PPPKTAVPSDYVQCEYCS 137

Query: 656 RRFN 667
           R FN
Sbjct: 138 RNFN 141


>Z67995-3|CAI79213.1|  150|Caenorhabditis elegans Hypothetical
           protein M153.4 protein.
          Length = 150

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 296 CGVCGRHFASDRIAKHQEIC-KKAHSKKRKPFDVLKHRLAGTEAEPFI 436
           C +CGR F S  IA H+  C KK H++  K     K R A  + E  I
Sbjct: 39  CFICGRQFGSKSIAIHEPQCLKKWHAENEK-LPKSKRRAAPVKPEAVI 85



 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 296 CGVCGRHFASDRIAKHQEIC 355
           C  CGR F  DR++ HQ  C
Sbjct: 111 CEHCGRKFNEDRLSVHQRSC 130


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 383 PFDVLKHRLAGTEAEPFINKLRKTTATPSTTKVNKG 490
           PFDV K R+ G + +PF  K   T  T S     +G
Sbjct: 217 PFDVAKSRIQGPQPDPFTRKYSGTMQTISLVYKEEG 252


>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
           protein F58G4.1 protein.
          Length = 1974

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 404 RLAGTEAEPFINKLRKTTATPSTTKVNKGKQLNS-NW 511
           +L   E+E FIN L K      T  VNKG+ L+  NW
Sbjct: 384 KLYCVESEKFINALLKPRVKVGTEWVNKGQNLDQVNW 420


>Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical
           protein F14B6.2 protein.
          Length = 720

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
 Frame = +2

Query: 314 HFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPST--TKVNK 487
           HF   +  K  E  K+   +K+K    LK     TEAE  +N    T+  P T  ++  K
Sbjct: 251 HFDLLKELKKDEEEKEKKKEKKKKGKGLKKAKKLTEAEKLLNNSTSTSVIPDTAVSRKPK 310

Query: 488 GKQLNSNWRQKHEEFIQAIRAAKQVQAHLNAGGKLSDLXXXXXSENPDYVQCPHCNRRFN 667
           GK L  + ++ +++        KQ +  +     LS       S   + V  P      N
Sbjct: 311 GKGLKKS-KKLNQKPKSDEEVTKQPRHLVGKSSSLSPTTPRPKSSWMNGVLDPQDPNFSN 369

Query: 668 QGRCR 682
           QG+ R
Sbjct: 370 QGQIR 374


>U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein97 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 453 VLRNLLIKGSASVPAKRCLSTSKGFLFLLWAFL 355
           ++R ++IK  A++   +C     GFL + W FL
Sbjct: 138 LIRYVIIKFGATMKFDKCSKPRFGFLVIFWCFL 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,735,420
Number of Sequences: 27780
Number of extensions: 271672
Number of successful extensions: 987
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)